| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2400 |
|---|
| Symbol | |
|---|
| ID | 8333749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 2717489 |
|---|
| End bp | 2718058 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644955553 |
|---|
| Product | Uracil phosphoribosyltransferase |
|---|
| Protein accession | YP_003113159 |
|---|
| Protein GI | 256391595 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.127783 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCAA TACCGCAAGG TGCGCGGTCG GTACTCGACG AGGCTGACAT CTCCCGGGCG
TTGACCCGGA TAGCGCACGA GATCCTCGAA CGCGCCAAGG GCGCCGAGGA CGTCATGCTC
CTGGGGATCC CCACCCGCGG CGCCACGCTC GCCAAGCGGC TGGCCGCCCG CATCGCCGAC
GTCGAGGGCA CCACGGTCCC CGTCGGTTTC CTGGACGTCA CCATGTACCG CGACGACCTG
CGCCTGAAGC CGGCCCGCGC GCTGGAGCGC ACCGAGATCC CCGACGAGGG GGTCGACGGC
CGCCTGATCG TCCTGGTGGA CGACGTGCTG TACTCCGGCC GGACCATCCG CGCCGCGCTG
GACGCCCTGA ACGACCTCGG CCGCCCGCGC GCGGTGCAGC TGGCGGTCCT GGTCGACCGC
GGCCACCGCG AGCTGCCGAT CCGCGCCGAC TACGTCGGCA AGAACCTGCC GACCTCGCAG
CGCGAGAGCG TGAAGGTCCG GCTGCGCGAG CACGACGGTG TGCAGCATGA TGCCGTCTAC
CTGGGGATTG AGAGCGAGAC GGCTATATGA
|
|---|
| Protein sequence | MSAIPQGARS VLDEADISRA LTRIAHEILE RAKGAEDVML LGIPTRGATL AKRLAARIAD
VEGTTVPVGF LDVTMYRDDL RLKPARALER TEIPDEGVDG RLIVLVDDVL YSGRTIRAAL
DALNDLGRPR AVQLAVLVDR GHRELPIRAD YVGKNLPTSQ RESVKVRLRE HDGVQHDAVY
LGIESETAI
|
|---|
| |