Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2396 |
Symbol | |
ID | 8333745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2714397 |
End bp | 2714789 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644955549 |
Product | Carboxymuconolactone decarboxylase |
Protein accession | YP_003113155 |
Protein GI | 256391591 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.938127 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTTCG AAGCAGCCAC CCTCGACCGC GAGGCCGGCT ACGCCCTGCT GGACGTGCTC CAGGACGAGG CGACGCAGAA CGCCGCCCTG CCCGGCGTGG AGAAGCTGGC GCCGGGCTTC ACGGACTGGA TCGTGACGGC GCTGTTCGGC GGCACGTACC AGCGCCCCGC GCTGACCCTG CGGGAGCGGC AGATCGTCAA CCTGGCCGCC CTGACGGCGC TGGGCGGCGT GGAGCCCCAG CTGGTCGGGC ATGTGAAGAC CAGCGAGCGG ATCGGCATGA GCCGGGAGGA GATCGTGGAG GTCTTCGTAC ATCTGGCGCC GTATGTCGGC GTGCCGAAGG CGCTGGCGGG GCTGCGGGCG GCTGCGGCAG CGTTCGAAGC GGCGGACAAG TGA
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Protein sequence | MDFEAATLDR EAGYALLDVL QDEATQNAAL PGVEKLAPGF TDWIVTALFG GTYQRPALTL RERQIVNLAA LTALGGVEPQ LVGHVKTSER IGMSREEIVE VFVHLAPYVG VPKALAGLRA AAAAFEAADK
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