Gene Caci_2396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2396 
Symbol 
ID8333745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2714397 
End bp2714789 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content71% 
IMG OID644955549 
ProductCarboxymuconolactone decarboxylase 
Protein accessionYP_003113155 
Protein GI256391591 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.938127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTCG AAGCAGCCAC CCTCGACCGC GAGGCCGGCT ACGCCCTGCT GGACGTGCTC 
CAGGACGAGG CGACGCAGAA CGCCGCCCTG CCCGGCGTGG AGAAGCTGGC GCCGGGCTTC
ACGGACTGGA TCGTGACGGC GCTGTTCGGC GGCACGTACC AGCGCCCCGC GCTGACCCTG
CGGGAGCGGC AGATCGTCAA CCTGGCCGCC CTGACGGCGC TGGGCGGCGT GGAGCCCCAG
CTGGTCGGGC ATGTGAAGAC CAGCGAGCGG ATCGGCATGA GCCGGGAGGA GATCGTGGAG
GTCTTCGTAC ATCTGGCGCC GTATGTCGGC GTGCCGAAGG CGCTGGCGGG GCTGCGGGCG
GCTGCGGCAG CGTTCGAAGC GGCGGACAAG TGA
 
Protein sequence
MDFEAATLDR EAGYALLDVL QDEATQNAAL PGVEKLAPGF TDWIVTALFG GTYQRPALTL 
RERQIVNLAA LTALGGVEPQ LVGHVKTSER IGMSREEIVE VFVHLAPYVG VPKALAGLRA
AAAAFEAADK