Gene Caci_2393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2393 
Symbol 
ID8333742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2712395 
End bp2712958 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content65% 
IMG OID644955546 
Producttranslation elongation factor P 
Protein accessionYP_003113152 
Protein GI256391588 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTAGCA CGAATGAACT GAAGAACGGC ATGGTCCTCA AGATCGACAA CCAGCTCTGG 
TCTGTCGTGG AGTTCCAGCA TGTCAAGCCG GGCAAGGGCC CCGCCTTCGT GCGCACGAAG
CTCAAGGCCG TGCTCTCGGG CAAGGTGGTC GACCGGACCT TCAACGCCGG TATCAAGGTC
GAGACGGCCA ACGTCGACCG CCGCGACATG CAGTACCTCT ACCAGGAGGG CACCGACTTC
GTGTTCATGG ACATGGACAC GTACGACCAG CTGCACGTCT CCGGCGACAC CGTCGGCACC
GCGGCCAACT ACATGCTCGA GGGCACCATG GCCCTGGTCG CCACGAACGA GGGCACGCCC
TTGTACGTGG AGCTGCCGGC CGCCGTCGAG CTCGTCATCG AGTACACCGA GCCGGGCCTG
CAGGGCGACC GCTCCACCGG CGGCACCAAG CCCGCCAAGC TGGAGACCGG CCACGAGATC
CAGGTCCCGC TGTTCCTGAC CACCGGCGAG AAGGTCAAGG TCGACACCCG CGACGGTTCC
TACCTCGGCC GCGTCAGCAG CTGA
 
Protein sequence
MASTNELKNG MVLKIDNQLW SVVEFQHVKP GKGPAFVRTK LKAVLSGKVV DRTFNAGIKV 
ETANVDRRDM QYLYQEGTDF VFMDMDTYDQ LHVSGDTVGT AANYMLEGTM ALVATNEGTP
LYVELPAAVE LVIEYTEPGL QGDRSTGGTK PAKLETGHEI QVPLFLTTGE KVKVDTRDGS
YLGRVSS