Gene Caci_2368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2368 
Symbol 
ID8333717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2685894 
End bp2686757 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content73% 
IMG OID644955521 
Productprotein of unknown function DUF161 
Protein accessionYP_003113127 
Protein GI256391563 
COG category[S] Function unknown 
COG ID[COG2364] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA CGGTGCCCGC CGAGCGCGTG TCCCACCCCG CCGCCGTGGC CGGCGACCAG 
GCCGAGCGCG CGATGCTCGG GCGGCACGAG GACCGGATCG CCGATCCGCT GCCGGTCGGC
GCCGCGGCTC GAGCCGCCCT GGCCTGGCTC TGGGCCCTGA TCCCCCGCGA CCGCCGCGCG
CACCGCATGG TCCAGCTCCA GCTCGGGCTG GTCCTGTACG GCGTCAGCGA CGGCATGATC
CTGATGTCCG GCCTCGGCGC CAACCCCTGG GACGTCTTCC ACCAGGGCCT GGCCAAGCAC
CTGGGTCTGC AGGTCGGCAC CACGGTGATC CTGGTCGGCG TGGCGGTGAT GCTGTTCTGG
ATCCCGCTGC GGCAGAAGCC CGGCTTCGGC ACGCTCAGCA ACGTGGTCGT GGTCGGCCTG
GCGATGGACG GCGCGATGGC CTGGATGCCG ACCCCGCACG CTTGGTGGCT GCGCTGGGGC
GAGATGCTCG CCGGCATCGC CCTGAACGGC GTGGCGACCG GCGCCTACAT CGGCGCCGGC
ATGGGTCCCG GCCCGCGCGA CGGCGTGATG ACCGGCTACG CCGCCCGCGG CCACTCGATC
CGCGTGGTCC GCACCTCGAT GGAGCTCACG GTCCTGTCCG TCGGCTGGCT CCTCGGCGGC
ACGGTGGGCA TCGGCACCGC CGCCTACGCC CTGCTGATAG GCCCGCTGGC GCACCGGTTC
ATCCCACTGC TGGCGATCAA GCCGAAGGAT GGCGCTGCGG CGGAGCGGAC GGCGAAGGCG
GAGAGGGTGG AGAAGGCCGA GAAGCGGCCT CGGGTGGCGG CGGGGGCAGG AGCGGGAGCG
CTGGCATCAG AGAACTGCTG CTGA
 
Protein sequence
MTSTVPAERV SHPAAVAGDQ AERAMLGRHE DRIADPLPVG AAARAALAWL WALIPRDRRA 
HRMVQLQLGL VLYGVSDGMI LMSGLGANPW DVFHQGLAKH LGLQVGTTVI LVGVAVMLFW
IPLRQKPGFG TLSNVVVVGL AMDGAMAWMP TPHAWWLRWG EMLAGIALNG VATGAYIGAG
MGPGPRDGVM TGYAARGHSI RVVRTSMELT VLSVGWLLGG TVGIGTAAYA LLIGPLAHRF
IPLLAIKPKD GAAAERTAKA ERVEKAEKRP RVAAGAGAGA LASENCC