| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2342 |
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| Symbol | |
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| ID | 8333691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2657706 |
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| End bp | 2659427 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644955495 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_003113101 |
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| Protein GI | 256391537 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCGC ACCGCTACCG GAGCGTCTTC GACCGCGTCG AGGTGCCGTT GACCGACCGG
ACCTGGCCCG ACCAGCGCTT CTCCGCCGCT CCGCTCTGGG TTCCGGTGGA CCTGCGCGAC
GGCAACCAGG CGCTGGCCGA GCCGATGGAC ACCGCGCGCA AGACGAAGAT GTTCGACCTC
TTCCTGCGGA TGGGTTACAA GGAGATCGAG GTCGCCTATC CCTCGGCGAG CCAGACCGAC
TTTGATTTCG TGCGCTCGCT GGCGGTCCGC GACGACATCC CCGAGGACGT CACGATCTCC
GTCTTCACCC CGGCCCGGCC GGAGCTGATC GAGCGCACCT TCGAGTCCGT CGAAGGCCTG
CCGAACGTTT TGGTCCACCT CTACACCGCG ACCGCGCCGG CCTGGCGCGA CCTGGTGCTG
CGCGGCAGCC GCGCCGAGGT CCTGGCGCTG ATCGAGGACG CCGCCGGACT GGTCGCCAAG
CTGGCTGACC AGCGCCTGGG GACCAAGCAC GGTCCCGGCG CCGGACGGAT GCGCTTCGAG
TTCTCGCCCG AGGTGTTCAA CCTGACCGAG CCCGACTACG TGATCGAGGT CTGCGACCGC
GTCACCGAGA TCTGGGACGC CTGCGCCGAC CGCCCGGTCG TGCACAACCT GCCGGCCACG
GTCGAGGTCG CGACGCCGAA CGTCTACGCC GACCAGATCG AGTACATGAG CCGCAGCCTG
GCGCGTCGCG AGCACGTCAT CTTGTCCGTG CACCCGCACA ACGACCGCGG TACCGGCGTG
GCCTGCGCCG AACTCGCGGT GCTGGCCGGG GCGCAGCGCG TCGAGGGCTG CCTGTTCGGC
AACGGCGAGC GCACCGGCAA CGTCGACCTG GTCACGCTGG CGCTGAACCT GCACGCCCAG
GGCGTGGACC CGATGATCGA CCTGTCCGAC ATCGACGCGG TCAAGGCCGT GGTCGAGGAG
TGCAACCGCA TCCCGGTCCA CGTGCGGCAC CCCTACGGCG GCGACCTCGT CTACACCGCG
TTCTCCGGCA CGCACCAGGA CGCCATCAGC AAGGGGATGG CGCACCACGC GGCGCGCGCC
GCCGAACTCG GCGTGCCGGC GAGCCAGGCG CCGTGGGACG TGCCGTATCT GCCGATCGAC
CCGGCGGACG TCGGGCGCAG CTACCAGGGC GTGATCCGGG TCAACAGCCA GTCCGGCAAG
GGCGGGATCG CCTACCTGCT GCGCACGCAC TACGGCGTCG ACCTGCCGCG CGACTTCCAG
CCGGGATTCT CCAAGGTGGT GCAGCGCGCG ACCGACGAGC ACGGCCGCGA GATGACGCCG
CAGGATCTGT GGGAGCTGTT CCGGACGACG TATGTCGTGC CGGGGGAGGA CGGCGCCTGG
AAGCTGACCG ATACGGCGTT CCAGGAGATC GAGGGCGGCG GGCACCGGGT CGAGGCGACA
GCCGTGCGCG CCGACGGCAC GGTGATCCCG GTCGCGGGCA TCGGGAACGG GCCGCTGTCC
GCGCTGACGG TGGCGCTGGC CAAGGCGGGC ATCGGCTTCG AGGTCGTCGA CTACACCGAG
AACGCGGTCT ACTCCGAACA CGCCGTCTCC GAAGGCGCCG ACGCCGTGGC GGTCTGCTAC
ATCCGTGCCC GGGTTGAGGG TCGGGAGGTT TGGGGCGTCG GGATGGATAC CTCGGTGCTC
ACGGCCATGG TGCGGGCGGC CGTCTCGGCA GTGAACCGGT AG
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| Protein sequence | MPSHRYRSVF DRVEVPLTDR TWPDQRFSAA PLWVPVDLRD GNQALAEPMD TARKTKMFDL
FLRMGYKEIE VAYPSASQTD FDFVRSLAVR DDIPEDVTIS VFTPARPELI ERTFESVEGL
PNVLVHLYTA TAPAWRDLVL RGSRAEVLAL IEDAAGLVAK LADQRLGTKH GPGAGRMRFE
FSPEVFNLTE PDYVIEVCDR VTEIWDACAD RPVVHNLPAT VEVATPNVYA DQIEYMSRSL
ARREHVILSV HPHNDRGTGV ACAELAVLAG AQRVEGCLFG NGERTGNVDL VTLALNLHAQ
GVDPMIDLSD IDAVKAVVEE CNRIPVHVRH PYGGDLVYTA FSGTHQDAIS KGMAHHAARA
AELGVPASQA PWDVPYLPID PADVGRSYQG VIRVNSQSGK GGIAYLLRTH YGVDLPRDFQ
PGFSKVVQRA TDEHGREMTP QDLWELFRTT YVVPGEDGAW KLTDTAFQEI EGGGHRVEAT
AVRADGTVIP VAGIGNGPLS ALTVALAKAG IGFEVVDYTE NAVYSEHAVS EGADAVAVCY
IRARVEGREV WGVGMDTSVL TAMVRAAVSA VNR
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