| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2334 |
|---|
| Symbol | |
|---|
| ID | 8333683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 2646675 |
|---|
| End bp | 2649287 |
|---|
| Gene Length | 2613 bp |
|---|
| Protein Length | 870 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644955487 |
|---|
| Product | DEAD/DEAH box helicase domain protein |
|---|
| Protein accession | YP_003113093 |
|---|
| Protein GI | 256391529 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4581] Superfamily II RNA helicase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGCGAA GCGGCCCGGA CGCGCCGATC GGCACCGGCG GCATCACCCG GCGAGCGCAT
ATTGTTGAAC GCACTATGAC CCTCACCGAT CGCCTGCCCG CCACCGACGA CCCCGACGAC
CTCTTCGACG CCTTCAGCGC CTGGGCCGGC GAGCAGGGGA TCACCCTCTA TCCGGCGCAG
GAGGAAGCGC TGCTGGAGGT GGTCACCGGG GCGAACCTGA TCCTGTCCAC CCCGACCGGC
TCCGGCAAGT CGCTGGTCGC CGCCGGCGCG CACTTCGCCG CCCTGGCGCG CTACCGGGAG
GACCCGACGC AGCGCACCTT CTACACCGCG CCGATCAAGG CGCTGGTGAG CGAGAAGTTC
TTCGCGCTGT GCGCCATGTT CGGAGCGGAC AAGGTGGGCA TGCTCACCGG CGACGCCAGC
GTGAACCCGA ACGCGCCGAT CATCTGCTGC ACCGCCGAGG TGCTGGCCAA CCACGCGCTG
CGCGACGGCA CCGAGGCCGA CGTCGGCCAG GTGGTGATGG ACGAGTTCCA CTTCTACGCC
GAGCCGGACC GCGGCTGGGC CTGGCAGGTG CCGATCCTGG AGCTGCCGAA GGCGCAGTTC
GTGCTGATGT CGGCCACCCT CGGCGACGTC AGCCGCTTCG AGAAGGACCT CACCCGCCGC
ACCGGCCGCC CGACCGCGGT GGTCTCCTCC GGGCAGCGCC CCGTGCCGCT GTACTACTCC
TACTCCGAGA CGCCGCTGCA CGAGACGCTG GAAGAGCTCC TGCAGACCAA CCAGGCGCCG
ATCTACGTCG TGCACTTCAC GCAGGCCGCG GCCATCGAGC GCGCGCAGGC CCTGATGAGC
GTCAACGTGT GCACCAAGGA GGAGAAGGCG AAGATCGCCG ACATGATCGG CAACTTCCGC
TTCACCGCCG GCTTCGGCAA GACGCTCTCG CGGCTGGTCC GGCACGGCAT CGGCGTCCAC
CACGCCGGCA TGCTGCCGAA GTACCGCCGG CTGGTGGAGC TGCTGGCGCA GGCCGGGCTG
CTGAAGGTGA TCTGCGGCAC CGACACCCTC GGCGTCGGCA TCAACGTGCC GATCCGCACC
GTGCTGTTCA CCGGGCTGAC CAAGTACGAC GGCGTGCGGA CCCGCCAGCT CAAGGCGCGC
GAGTTCCACC AGATCGCCGG GCGCGCCGGC CGGGCCGGGT ACGACAGCGC CGGCTACGTC
GTGGCGCAGG CGCCCGAGCA CGAGGTGGAG AACGCCAAGC GCGTGTCCAA GGCCGGCGGG
GACAAGAAGA AGCTCTCGCG CGTGGTCCGG GTCAAGGCGC CGGAGGGCTT CGTCTCCTGG
GGCAAGCCGA GCTTCGAGCG CATGGTCGCC GCCGAGCCGG AGCCGCTGAC CTCCAGTTTC
CAGGTCAGCC ACGCGATGCT GCTGAACGTC ATCAGCCGCC CCGGCGACTC CTTCGACGCC
ATGCGGCACC TGCTGGAGGA CAACCACGAG GACCGCAAGT CCCAGCTGAA GCTGATCCGC
AAGGCGATCG CCATCTACCG CGCGCTTCTC GCCGCCGGGA TCGTCGAGCA GCTGGACGCC
CCCGACGAGC AGGGCCGGAT CGTGCGGCTG ACCAAGGACC TGCAGTTCGA CTTCGCCCTG
AACCAGCCGC TGTCGCCGTT CGCGCTGGCG ACGCTGGAGC TGCTGGAGCC GGAGTCGCCG
ACCTACGCGC TGGACGTCCT GTCGGTCATC GAGTCGACGC TGGACAATCC GCGCCAGGTG
CTGTCCGCGC AGCAGAACAA GGCGCGCGGC GAGGCGGTCG CGCAGATGAA GGCGGACGGG
ATCGAGTACG AGGAGCGCAT GGAGCTCCTG GAGAACGTCG GATATCCCAA GCCGTTGCAG
GAGCTCCTTG AGGCGGCGTA CGACGTCTAC AAGCGCAGTT CCCCTTGGGT CGCTGACTAC
GAGGTCGCCC CGAAGTCCGT CGCGCGGGAC ATGTTCGAGC GCGCCATGAC CTTCGCGGAG
TACGTGAGCT TCTATACGCT CCCGCGCTCG GAAGGGCTCC TGCTGCGCTA CCTCGCCGAC
GCCTTCAAGG CGCTCAAGCA CACCGTGCCC GAGGAGATGC GCAACGACGA GGTCGACGAC
CTCATCGAGT GGCTCGGCGA GATGGTGCGC CAGGTCGACT CCTCTCTGCT CGACGAGTGG
GAGGAGCTGG TCAACCCTGG GGAGGAGGCG CCCGCGATCT CCCCGCACAA CTTCGACGAG
CGCCCGCCGC CGGTCACCGC GAACGCCCGC GCCTTCCGCG TCATGGTCCG CAACGAGCTG
TTCCACCGCG TCGAGCTGTT CGCGCTGCGG AAGTACAACG ACCTCGGCGA GCTGGACGCG
GCCTCGGGCT GGGATTCCGA GAAGTGGTAC TACGCGATCG AGGACTACTT CGAGGTCCAC
GACATGCTCG GTACCGACTC GAACGCGCGC GGCCCGAAGC TGCTCATCAT CGACGAGAAG
CCCGAGGGAC AGCCCGGCAA GTGGCTCGTC CGTCAGATCT TCGACGACCC CGAGGGCGAC
CACGACTGGG GGATCAGCGC CGAGGTGGAC CTGGCGGCGA GCGACGAGGC GGGGACCGCC
GTGGTGGTCG TCACCGACGT GAACCAGCTG TGA
|
|---|
| Protein sequence | MRRSGPDAPI GTGGITRRAH IVERTMTLTD RLPATDDPDD LFDAFSAWAG EQGITLYPAQ
EEALLEVVTG ANLILSTPTG SGKSLVAAGA HFAALARYRE DPTQRTFYTA PIKALVSEKF
FALCAMFGAD KVGMLTGDAS VNPNAPIICC TAEVLANHAL RDGTEADVGQ VVMDEFHFYA
EPDRGWAWQV PILELPKAQF VLMSATLGDV SRFEKDLTRR TGRPTAVVSS GQRPVPLYYS
YSETPLHETL EELLQTNQAP IYVVHFTQAA AIERAQALMS VNVCTKEEKA KIADMIGNFR
FTAGFGKTLS RLVRHGIGVH HAGMLPKYRR LVELLAQAGL LKVICGTDTL GVGINVPIRT
VLFTGLTKYD GVRTRQLKAR EFHQIAGRAG RAGYDSAGYV VAQAPEHEVE NAKRVSKAGG
DKKKLSRVVR VKAPEGFVSW GKPSFERMVA AEPEPLTSSF QVSHAMLLNV ISRPGDSFDA
MRHLLEDNHE DRKSQLKLIR KAIAIYRALL AAGIVEQLDA PDEQGRIVRL TKDLQFDFAL
NQPLSPFALA TLELLEPESP TYALDVLSVI ESTLDNPRQV LSAQQNKARG EAVAQMKADG
IEYEERMELL ENVGYPKPLQ ELLEAAYDVY KRSSPWVADY EVAPKSVARD MFERAMTFAE
YVSFYTLPRS EGLLLRYLAD AFKALKHTVP EEMRNDEVDD LIEWLGEMVR QVDSSLLDEW
EELVNPGEEA PAISPHNFDE RPPPVTANAR AFRVMVRNEL FHRVELFALR KYNDLGELDA
ASGWDSEKWY YAIEDYFEVH DMLGTDSNAR GPKLLIIDEK PEGQPGKWLV RQIFDDPEGD
HDWGISAEVD LAASDEAGTA VVVVTDVNQL
|
|---|
| |