Gene Caci_2333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2333 
Symbol 
ID8333682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2645683 
End bp2646528 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content68% 
IMG OID644955486 
Productpeptidase M50 
Protein accessionYP_003113092 
Protein GI256391528 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCA ACAACCTGCG CCTGCTCCAG CCCGGCGAGT ACCGCCCCGA CTGGTCGCAG 
GCGGCTCGCG GCGGCGGTAT CTCACCGATC TTCCTGGCCC TGATAGCCGG CTTCGCGGCC
AGCGGCTTCG CGCTCTACAA GGGCTATGGC AGCGACCGCG CGGGCGTGTT CATCTTCGTG
CTCTGCGGCT GGCTGATATC GCTGTGCCTG CACGAGTTCA TGCACGCCGC GGCCGCCTAC
TGGGCCGGCG ACCACACGGT GGCCGGCAAG GGCTACCTGC GCCTGGACCC GCGCGTCTAC
GGACACCCGG TCCTGACCTT CGTGCTGCCG CTGTTCTTCC TGCTCGTCGG CGGGCTGCCG
CTGCCCGGCG GCGCGGTGGC GATCGAGTCG CACCGCTTGC GCGGGAAGTG GAAGGACTCG
CTGGTCTCGG CGGCGGGTCC GGCGGTGAAC GTGGTCTTCT CGATCGTGCT GCTCGCGGTG
CTGGACGGCT TCGGCCCGCC GTGGATCTTC TCCCCCACGT CTCCGGACCA CGCCGCACTC
TGGTCGGCGC TGACGTTCCT GGCGTACATC CAGATCGCGA GCGCGATCCT GAACCTGCTG
CCGATCCCCG GGCTCGACGG CTACGGCATC ATCGAGCCCT TCCTGAGCGC CGACTGGCGC
CGCATGGCGG CGCAGATCGC GCCGTACGGG ATCCTGATCG TGTTCGTGCT GCTGTACGCG
CTGGGTCCGG ACAAGAACTT CATCGCGAAC TGGGCGCACG ACATCCTGGA GCCGCGGTCG
CCGGTGAACG GGGAGTACTT CGGATACAAC CTGTTCAAGT TCTGGGGCAG CTTCAACGGC
GGGTAG
 
Protein sequence
MARNNLRLLQ PGEYRPDWSQ AARGGGISPI FLALIAGFAA SGFALYKGYG SDRAGVFIFV 
LCGWLISLCL HEFMHAAAAY WAGDHTVAGK GYLRLDPRVY GHPVLTFVLP LFFLLVGGLP
LPGGAVAIES HRLRGKWKDS LVSAAGPAVN VVFSIVLLAV LDGFGPPWIF SPTSPDHAAL
WSALTFLAYI QIASAILNLL PIPGLDGYGI IEPFLSADWR RMAAQIAPYG ILIVFVLLYA
LGPDKNFIAN WAHDILEPRS PVNGEYFGYN LFKFWGSFNG G