Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2316 |
Symbol | |
ID | 8333665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2620206 |
End bp | 2621114 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644955469 |
Product | protein of unknown function DUF6 transmembrane |
Protein accession | YP_003113075 |
Protein GI | 256391511 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATCTATC TAGTCCTTTC CGGCGTGCTC TGGGGCACCG GCGGGCTGAC CGGCCGCCTG CTGTCGCTGC ACACCCGCCT TTCCCCCACC GCCGTGGCCG GCTACCGGCT GCTGATCGGC GGCACACTGC TCATCCTGTT CGCGGCTGTC ACCGGCCGCG GACGCCGGGA CGCGGGCCCA GCCGCCCGGT CCCGGCGTCC TCGCGGCCGT GCGGCGTGGC GCCGCGTCGG CGTCGTCGGC GCGCTGTCGG CGGGTTTTCA GGCCTGCTAC TTCGCGGCGG TGGCGCTGAC CGACGTCAGC CTGGCCACGC TGGTCACCAT CGGCGCCGCT CCCGTCCTGG TCGCCGCCTT CGAGCAGGCG ACCGGGCGGC GGGGGTTCGA CCCGCGCGCG GCGGCCACGG TGGCCCTGGC GCTGGCCGGT CTCGGCTTGC TGGTCGGCGA GCCGCCGCAC GGTGTCACCG GCGCGCACCT CGCGGCCGGC GCCGGGTTCG CGGTCGCCAG CGCCGCCGGG TTCTCGGCGA TCAGCGTCCT CGGCAAGAAC CCGGTCGCGG GCCTCGGCGA GGTCACGATG ACCGGGTACA GCTTCACCCT CGGCGGTCTG GCGCTGGTCG CCGCCGCCGC GCTCACCACC GGCGCCGGGT TCGCGCCGCG TCCGGCAGCG GTCGGGCTGC TGCTGCTGCT CGGCCTGGTG CCGACCGCCA TCGCCTACGG CTGCTACTTC ATCGGCCTGC GCGAGGCGGC GGCCAGCACC GGGACCGTCA CGGCGCTGTT GGAACCGCTG ACCGGCACGG TCCTGGCCGT CCTGCTGCTC GGGGACCGCC TCACGGCGGT CGGAGCCGTC GGCGCGGCGC TGCTCGCGGT GTCGGTGACC GCCGAGACCT GGCACGCCCG GCCGCGCGTG GCGGGATAG
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Protein sequence | MIYLVLSGVL WGTGGLTGRL LSLHTRLSPT AVAGYRLLIG GTLLILFAAV TGRGRRDAGP AARSRRPRGR AAWRRVGVVG ALSAGFQACY FAAVALTDVS LATLVTIGAA PVLVAAFEQA TGRRGFDPRA AATVALALAG LGLLVGEPPH GVTGAHLAAG AGFAVASAAG FSAISVLGKN PVAGLGEVTM TGYSFTLGGL ALVAAAALTT GAGFAPRPAA VGLLLLLGLV PTAIAYGCYF IGLREAAAST GTVTALLEPL TGTVLAVLLL GDRLTAVGAV GAALLAVSVT AETWHARPRV AG
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