Gene Caci_2316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2316 
Symbol 
ID8333665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2620206 
End bp2621114 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content76% 
IMG OID644955469 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_003113075 
Protein GI256391511 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATCTATC TAGTCCTTTC CGGCGTGCTC TGGGGCACCG GCGGGCTGAC CGGCCGCCTG 
CTGTCGCTGC ACACCCGCCT TTCCCCCACC GCCGTGGCCG GCTACCGGCT GCTGATCGGC
GGCACACTGC TCATCCTGTT CGCGGCTGTC ACCGGCCGCG GACGCCGGGA CGCGGGCCCA
GCCGCCCGGT CCCGGCGTCC TCGCGGCCGT GCGGCGTGGC GCCGCGTCGG CGTCGTCGGC
GCGCTGTCGG CGGGTTTTCA GGCCTGCTAC TTCGCGGCGG TGGCGCTGAC CGACGTCAGC
CTGGCCACGC TGGTCACCAT CGGCGCCGCT CCCGTCCTGG TCGCCGCCTT CGAGCAGGCG
ACCGGGCGGC GGGGGTTCGA CCCGCGCGCG GCGGCCACGG TGGCCCTGGC GCTGGCCGGT
CTCGGCTTGC TGGTCGGCGA GCCGCCGCAC GGTGTCACCG GCGCGCACCT CGCGGCCGGC
GCCGGGTTCG CGGTCGCCAG CGCCGCCGGG TTCTCGGCGA TCAGCGTCCT CGGCAAGAAC
CCGGTCGCGG GCCTCGGCGA GGTCACGATG ACCGGGTACA GCTTCACCCT CGGCGGTCTG
GCGCTGGTCG CCGCCGCCGC GCTCACCACC GGCGCCGGGT TCGCGCCGCG TCCGGCAGCG
GTCGGGCTGC TGCTGCTGCT CGGCCTGGTG CCGACCGCCA TCGCCTACGG CTGCTACTTC
ATCGGCCTGC GCGAGGCGGC GGCCAGCACC GGGACCGTCA CGGCGCTGTT GGAACCGCTG
ACCGGCACGG TCCTGGCCGT CCTGCTGCTC GGGGACCGCC TCACGGCGGT CGGAGCCGTC
GGCGCGGCGC TGCTCGCGGT GTCGGTGACC GCCGAGACCT GGCACGCCCG GCCGCGCGTG
GCGGGATAG
 
Protein sequence
MIYLVLSGVL WGTGGLTGRL LSLHTRLSPT AVAGYRLLIG GTLLILFAAV TGRGRRDAGP 
AARSRRPRGR AAWRRVGVVG ALSAGFQACY FAAVALTDVS LATLVTIGAA PVLVAAFEQA
TGRRGFDPRA AATVALALAG LGLLVGEPPH GVTGAHLAAG AGFAVASAAG FSAISVLGKN
PVAGLGEVTM TGYSFTLGGL ALVAAAALTT GAGFAPRPAA VGLLLLLGLV PTAIAYGCYF
IGLREAAAST GTVTALLEPL TGTVLAVLLL GDRLTAVGAV GAALLAVSVT AETWHARPRV
AG