Gene Caci_2301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2301 
Symbol 
ID8333650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2606816 
End bp2607520 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content70% 
IMG OID644955454 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_003113060 
Protein GI256391496 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCCGGT CCGTACTGGT CACCGGGGGA AACCGGGGAA TTGGCCTGGC CATCGCGAAG 
GCCTTCGCCG CCGCCGGGGA CAAGGTCGCG ATCACCTACC GCTCGGGCGA GGTCCCCGAG
GGGCTGTTCG GCGTGAAGTG CGACGTGACC TCCGCCGAGG ACGTCGACCG CGCCTTCGGC
GAGGTCGAGG CCCAGCAGGG CCCGGTCGAA GTGCTCGTCG CCAACGCCGG CATCACCCGC
GACACCTTGC TGCTGCGGAT GAGCGACGAG GACTTCGAGG CGGTGCTGGA CACCAACCTG
GTCGGCACCT TCCGCGCGGC CAAGCGCGCC AGCAAGGGCA TGCTGCGCCT CAAGCGCGGC
CGCATCGTCC TGATCTCCTC GGTGGTCGGG CTGTCCGGCT CGGCCGGGCA GGCGAACTAC
GCGGCGAGCA AGGCCGGGCT GGTCGGCTTC GCGCGCTCGG TGGCCCGCGA GATCGGCTCG
CGCGGCATCA CCTGCAACGT GGTCGCCCCC GGCTTCGTGC AGACCGACAT GACCGCGGTC
CTGTCCGAGG ACCGCAAGGC CGAGATCCTC AAGCAGGTGC CGTTGAACCG CTACGCGACC
ACCGACGAGG TCGCCGGGGT CGTCCGGTTC CTGGCCTCGG AGGAAGCCGC GTACATCACT
GGAGCCGTCA TCCCGGTTGA CGGCGGACTG GGAATGGGTC ACTGA
 
Protein sequence
MSRSVLVTGG NRGIGLAIAK AFAAAGDKVA ITYRSGEVPE GLFGVKCDVT SAEDVDRAFG 
EVEAQQGPVE VLVANAGITR DTLLLRMSDE DFEAVLDTNL VGTFRAAKRA SKGMLRLKRG
RIVLISSVVG LSGSAGQANY AASKAGLVGF ARSVAREIGS RGITCNVVAP GFVQTDMTAV
LSEDRKAEIL KQVPLNRYAT TDEVAGVVRF LASEEAAYIT GAVIPVDGGL GMGH