Gene Caci_2299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2299 
Symbol 
ID8333648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2603722 
End bp2605140 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content72% 
IMG OID644955452 
Producthypothetical protein 
Protein accessionYP_003113058 
Protein GI256391494 
COG category[R] General function prediction only 
COG ID[COG0312] Predicted Zn-dependent proteases and their inactivated homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCC AGCACTCCAC CCCGCAGCAG CTGGTCGACA AGGCCCTGGA GCTCTCGCGC 
GCCGACGGCG CCGTGGTGCT CGTGGACGCC GGGACCGACG CCAACCTGCG CTGGGCCAAC
AACACCCTGA CCACCAACGG CGTCTCGGCC GGGCAGTCCG TCACGGTGAT CTCGGTGAAG
AACGGCGCGG CCGGCGCCGC CTCGGCCTCG GCCGGCGTGG TCGGCCGCTC CGGGGTGGAC
CTGTCCACCA TCGAGGACCT GGTCCGGGCC AGCGAGAAGG CCGCCGAGGA GTCCGGGCCC
GCCGAGGACG CCTTCGAGCT GGTCGCCGGC CGCTCCTCGG CGGACTGGGA CGAGCCGCCG
GCGCAGACCG ACATCTCGGT GTTCTCCTCC TTCGCCCCGG CGCTCGGTGA GACCCTCGCG
GCCGCGCGCG CCGAGGGCAA CCTGCTGTTC GGCTACGCCG AGCACAGCAT GGGCACCCAG
TACCTGGGCT CGTCGGCCGG CCTGCGGCTG CGGCACGCGC AGCCCACCGG CTCGGTGCAG
CTCAACGCCA AGTCCGGCGA CCGGTCCCGC TCGGCGTGGA GCGGCGTGCC GACCGCGGAC
TTCTCCGACG TGGACGTCGT GGCCGCCGGC CAGGATCTGG CACGCCGCCT GGAGTGGGCC
AAGCGCAAGA TCGACCTGCC CGCCGGGCGC TACGAGACGA TCCTGCCGCC GTCCTCGGTC
GCCGATCTGA TGATCTACGC GTACTGGAAC GCCGCGCTGC GCGACGCGCT CGACGGCCGC
TCGGTGTTCA GCAAGAGCGG CGGCGGGTCC AAGCTCGGCG AGAACGTCGC GGGCTCCTCG
GCGATCAAGG CGACGCTGCG CAGCGACCCG TACGCACCCG GGCTGGAGTG CGCTCCTTAC
GCGACGGCGT ACTCCTCGAA CGCCTACGAG TCGGTGTTCG ACAACGGCCT CGCGCTCGCC
CCGACCGAGT GGATCAAGGA CGGCGAGCTC TCCACGCTGC TCAGCACCCG GCAGACCGCG
GGGGCGGCGA AGGTCCCGGT GGCGCCGTGG GTCGACAACC TGATCCTGGA CGCGACGCCC
GGCGGGACCG GTCCCTCGCT GGCCGAGATG ACCGCCGCGA CCGGCGACGG CCTGCTGGTG
ACCAGCCTGT GGTACATCCG CGAGGTGGAC CCGCAGACCC TGCTGCTGAC CGGGCTGACC
CGGGACGGCG TGTACAAGGT CGAGGGCGGC GAGGTGGTCG GCGTGGTGAA CAACTTCCGG
TTCAACGAGT CGCCGGTGTC GATGCTCTCG CGGATCGCCG AGGCCGGGCA GACCGAGCGG
ACCTTCTCCC GGGAGTGGGG CGACTACTTC AACCGGACCG CGATGCCGGC GCTGCGGATC
CCGGACTTCA ACATGTCCTC GGTGAGCCCG GCCTCCTAG
 
Protein sequence
MSTQHSTPQQ LVDKALELSR ADGAVVLVDA GTDANLRWAN NTLTTNGVSA GQSVTVISVK 
NGAAGAASAS AGVVGRSGVD LSTIEDLVRA SEKAAEESGP AEDAFELVAG RSSADWDEPP
AQTDISVFSS FAPALGETLA AARAEGNLLF GYAEHSMGTQ YLGSSAGLRL RHAQPTGSVQ
LNAKSGDRSR SAWSGVPTAD FSDVDVVAAG QDLARRLEWA KRKIDLPAGR YETILPPSSV
ADLMIYAYWN AALRDALDGR SVFSKSGGGS KLGENVAGSS AIKATLRSDP YAPGLECAPY
ATAYSSNAYE SVFDNGLALA PTEWIKDGEL STLLSTRQTA GAAKVPVAPW VDNLILDATP
GGTGPSLAEM TAATGDGLLV TSLWYIREVD PQTLLLTGLT RDGVYKVEGG EVVGVVNNFR
FNESPVSMLS RIAEAGQTER TFSREWGDYF NRTAMPALRI PDFNMSSVSP AS