Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2292 |
Symbol | |
ID | 8333641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2598156 |
End bp | 2598647 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644955445 |
Product | protein of unknown function DUF1003 |
Protein accession | YP_003113051 |
Protein GI | 256391487 |
COG category | [S] Function unknown |
COG ID | [COG4420] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCAC AAGCTCAGCT CAAGTCGACG GTGAAGTCCG CTGTGAGGCA CATAGCCCCG GGCAGCTGGC GCCGGCACCC CGGCGTCCGC ACCGGCGAGC AGCTCACCCG GGGCGAACGC GCCGCCGACA AGATGCGCAA CAGCATGGGC TCCTGGATGT TCGTCTTCGT CGCGGTGGCC TTCCTGGCCG TGTGGATGAC CCTCAACGTC CTCCTGGACA CGTCGACCGG CCACACCTTC GACGCCTACC CGTTCATCCT CCTCAACCTG GTCCTGTCCT GCGTAGCGGC CCTCCAAGGC GCGATCCTCC TGATCGCCGC CAAGCGCTCG GACCAGGTGG CCAGCGAACT CGCCCAGCAC GACTACGAAG CGGACTGCCA GTCCCGCGAG ATGCTCCAGG TCCTCACCGA GGAGTTCGCA ACCCTGCGCA CCCAGCACGC CGAGCAGAGC CAGCAGCTGG CCGAGCTGAT CGCGCGGCTG CCGCAGGGGT AG
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Protein sequence | MTAQAQLKST VKSAVRHIAP GSWRRHPGVR TGEQLTRGER AADKMRNSMG SWMFVFVAVA FLAVWMTLNV LLDTSTGHTF DAYPFILLNL VLSCVAALQG AILLIAAKRS DQVASELAQH DYEADCQSRE MLQVLTEEFA TLRTQHAEQS QQLAELIARL PQG
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