Gene Caci_2292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2292 
Symbol 
ID8333641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2598156 
End bp2598647 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content68% 
IMG OID644955445 
Productprotein of unknown function DUF1003 
Protein accessionYP_003113051 
Protein GI256391487 
COG category[S] Function unknown 
COG ID[COG4420] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCAC AAGCTCAGCT CAAGTCGACG GTGAAGTCCG CTGTGAGGCA CATAGCCCCG 
GGCAGCTGGC GCCGGCACCC CGGCGTCCGC ACCGGCGAGC AGCTCACCCG GGGCGAACGC
GCCGCCGACA AGATGCGCAA CAGCATGGGC TCCTGGATGT TCGTCTTCGT CGCGGTGGCC
TTCCTGGCCG TGTGGATGAC CCTCAACGTC CTCCTGGACA CGTCGACCGG CCACACCTTC
GACGCCTACC CGTTCATCCT CCTCAACCTG GTCCTGTCCT GCGTAGCGGC CCTCCAAGGC
GCGATCCTCC TGATCGCCGC CAAGCGCTCG GACCAGGTGG CCAGCGAACT CGCCCAGCAC
GACTACGAAG CGGACTGCCA GTCCCGCGAG ATGCTCCAGG TCCTCACCGA GGAGTTCGCA
ACCCTGCGCA CCCAGCACGC CGAGCAGAGC CAGCAGCTGG CCGAGCTGAT CGCGCGGCTG
CCGCAGGGGT AG
 
Protein sequence
MTAQAQLKST VKSAVRHIAP GSWRRHPGVR TGEQLTRGER AADKMRNSMG SWMFVFVAVA 
FLAVWMTLNV LLDTSTGHTF DAYPFILLNL VLSCVAALQG AILLIAAKRS DQVASELAQH
DYEADCQSRE MLQVLTEEFA TLRTQHAEQS QQLAELIARL PQG