Gene Caci_2288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2288 
Symbol 
ID8333637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2593565 
End bp2594890 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content71% 
IMG OID644955441 
Productamidohydrolase 2 
Protein accessionYP_003113047 
Protein GI256391483 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGAGT TCGACAACAG TCCCTACGTG GTGGTCTCCT CCGACTGCCA CGCCGGGCTG 
CCGACCGAGG AGTACCGCCC CTACATCGAG GCCAAGTACC ACCCGGCCTT CGACGACTTC
CTGGCCGAGC AGGCCGCCCG CGTCGAGGCC GCGACCAAGC TCGGCGTCCG GAACCCGGAG
TTCGCCCGCG CCTGGTTCGA AGAGCACGAA GAAGGCCTGC GCGGCGGCTG GGACTCGGCG
CAGCGCGACA AGGAACTCGA CGCCGACGGC GTGACCGCCG AGGTGATCTT CCCGGACGCC
GACGCCGTGG AGTCCACCAC CGCCGCGCCG TTCGGCGTCG GTCTGACCTT CTCCGGCGGC
CTGGACCAGG AGCTGGCGCT GGTCGGCGCC CGCGCGCACA ACCGCTGGCT GGCCGAGCTG
TGCTCGCACT CCCCGGAGCG GCGGCGCGGC GTGGCGCTGG TACCGATCAC CGGCGACGTG
GACGCCGCGG TCGCCGAGAT CCGGCGCGCC AAGGAGTCCG GGCTCGGCGC GGTGATGATC
CCGGCGATGT GGGAGGACAA GGCGCCCTAC CACGACCGCC GCTACGACCC GGTCTGGGCG
GTCTGCGAGG AGCTGCGGAT GCCGGTGGCG ACCCACTCCG GCGTGGCTCC GCGCGACGAG
TACGGCGACC ACCTCGGGAT CTACGTCTCC GAGGTCACCT GGTGGCCGGC CCGGCCGATC
TGGTTCCTGA TCTGGTCCGG GGTGTTCGAG CGCTTCCCCG GGCTGAAGTT CGGCGTCACC
GAGGCCGGCT GCTGGTGGGC GCCGAACCTG CTGTGGTTCA TGGACCGGCT GTTCCTCGGC
GCGCACGCCG CCGCCAAGCT GACGCCGTTC GAGGAGGTGA AGCGGCCGCC GAGCGAGTAC
TTCGACCGCA ACTGCTTCAT CGGCGCCTCC AACACCAAGC GCCGCGAGCT GGCGCACCGC
TACGAGATCG GCATCGACAA CATGCTGTGG GGCAACGACT TCCCGCATCC GGAAGGGACC
TGGCCGAACA CCCGCAAGTG GCTCAGGACC ACGTTCCACG ACATACCGGT CGACGAGACG
CGTCGGATGA TCGGACTGGC CGCGGCCGAG ACATACGGCT TCGACGTCGC CAAGCTCGCG
CCGGTCGCCG AGCGCGTCAA CCTGCGTCCC GGCGACCTCG GCCAGAGCGG CGGGGAGGCG
GCCGGCTGGG CCGCCGCGCG CGAGGTCGGG CGGCACTGGC TGACCGGCCA CGACTTCCCG
GTCATCGGCT ACGGCGCGAC GCTCGGCGGC CACCGCACCG ACGACGTCGG ACCGGAGGTG
TCGTGA
 
Protein sequence
MPEFDNSPYV VVSSDCHAGL PTEEYRPYIE AKYHPAFDDF LAEQAARVEA ATKLGVRNPE 
FARAWFEEHE EGLRGGWDSA QRDKELDADG VTAEVIFPDA DAVESTTAAP FGVGLTFSGG
LDQELALVGA RAHNRWLAEL CSHSPERRRG VALVPITGDV DAAVAEIRRA KESGLGAVMI
PAMWEDKAPY HDRRYDPVWA VCEELRMPVA THSGVAPRDE YGDHLGIYVS EVTWWPARPI
WFLIWSGVFE RFPGLKFGVT EAGCWWAPNL LWFMDRLFLG AHAAAKLTPF EEVKRPPSEY
FDRNCFIGAS NTKRRELAHR YEIGIDNMLW GNDFPHPEGT WPNTRKWLRT TFHDIPVDET
RRMIGLAAAE TYGFDVAKLA PVAERVNLRP GDLGQSGGEA AGWAAAREVG RHWLTGHDFP
VIGYGATLGG HRTDDVGPEV S