Gene Caci_2286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2286 
Symbol 
ID8333635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2591814 
End bp2592656 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content70% 
IMG OID644955439 
ProductAcetoacetate decarboxylase 
Protein accessionYP_003113045 
Protein GI256391481 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4689] Acetoacetate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGAG TCCGGTACGG CCCGCGCGAC CTCGAAGCGG TCGCCGCCGC CCGCGAATCC 
GCCGCCAAGC TGCCCGATCT GTGGTCCACC GGCGTCCACG CCGTCTGGGA GACCGACCCC
GACGCCCTGG CGCAGGTCCT GCCCCCGCCC CTGAAGCCCA CCGCCAAGCC GTACGTGCGC
GCCACGATCA ACCAGGTCGA CATGTCCGTC TTTGACGACC ATCAACACAG CGGCGCGCCA
TTGGGCGCCG CCGCGATTTC CGTGGCCTGC GCCCACGGCG GCGAAGAAGG CTGGTACAGC
CTGGTCATGC CGATGACCAC CGAGCGCTCG CTGATCGGCG GCCGGGAGGT GTTCGGCGAG
CCGAAGAAGC TGGCCGAGGT CGTCGTCGAC CGCGACGGCG AGCAGGTGGC CGGCACGGTC
ACCCGGCACG GCGTCACCTT CGCCGAGATC CGCGGCCGGA TCGCCGGCGC GCTGGAACCG
CCGGCGCCCT ACGTCAAGGT CGACTGGTAC CTGAAGTTCC TGCCCGCGGT GGACGGCTCC
GGCTTCGACG CCGACCCGCT GCTCGTGCGC TGCCTGCGCA CCGAGAAGAC CCGCTCGCTG
AACGCCGTCG AGGGTGAGGT GATCCTCCGC GACTCCGATC TGGACCCGAT CGCCGACCTC
CCGGTGCTCC GGCTGGTCGA GATCACCTAC GGCGAGAAGA CCTCCGACCA GCGCGGCGAG
GTCGTGGCGA GGCTGGATCC GCAGGAGATC CTGCCCTACG TCCACCAGCG CTACGACGAC
CCCGCGCAGG TCCACGACTC GGTACTGCTT AAGGACCCCG CCGAGGTGTC CGATGCTGAC
TGA
 
Protein sequence
MPRVRYGPRD LEAVAAARES AAKLPDLWST GVHAVWETDP DALAQVLPPP LKPTAKPYVR 
ATINQVDMSV FDDHQHSGAP LGAAAISVAC AHGGEEGWYS LVMPMTTERS LIGGREVFGE
PKKLAEVVVD RDGEQVAGTV TRHGVTFAEI RGRIAGALEP PAPYVKVDWY LKFLPAVDGS
GFDADPLLVR CLRTEKTRSL NAVEGEVILR DSDLDPIADL PVLRLVEITY GEKTSDQRGE
VVARLDPQEI LPYVHQRYDD PAQVHDSVLL KDPAEVSDAD