Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2285 |
Symbol | |
ID | 8333634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2591083 |
End bp | 2591724 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644955438 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003113044 |
Protein GI | 256391480 |
COG category | |
COG ID | |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACTCAGG AGACGGCGAA ACCCCCGCGC GCCCCGGCGG TGACCCGCCG CGCCGTCCTC GACGCCGCGA CGCGGCTGGT CGAGGAGCAG GGGGTGTCCG GGCTGTCGAT GCGCAAGCTC GCCGCCGAGC TGGGGGTCGC GGTCACCTCG ATCTACTGGC ACGTCGGCAA CCGCGAGGCG CTGCTCGACG AGCTGGTGCA GGAGATGGTG CACGGCCTGG ACACGCTGCC GGCCCGCGGG ACGACGCCGA CGGCACGCGT GCTCTCGCTC GCGGTGGAGC TGCGGCGGGT CCTGCGGGAG CACCCGCACC TGATCGGGCT GGTCAACGAG CGCGGGCTGA CACCGGCGAT GTTCCTGCCC TCGCAGCGGA CGCTGGTGGC GGAGATCTCG GCGGCCGGGC TGCGCGGCAT CCGCGCGGCC GAGGTGGTGC GCGCCTTGCA GTTTCATGTG ATCGGCTTCG TACTCGTCGA GCGGCACACC GACCGCTCGC CGGAACAGCA CCCCTCGGCG GAGGAGCTGT GGCTGGCCGA ACCAGGGTCG GACGCCGCCC TGGCCGGCGC GCTGGCGACG GCGGTGGACG CCGACCGGCT GTTCGCGGTG GCGACCGAGG CGCTGGTGCG GTCGCTGCTC GCGGATCAGT AG
|
Protein sequence | MTQETAKPPR APAVTRRAVL DAATRLVEEQ GVSGLSMRKL AAELGVAVTS IYWHVGNREA LLDELVQEMV HGLDTLPARG TTPTARVLSL AVELRRVLRE HPHLIGLVNE RGLTPAMFLP SQRTLVAEIS AAGLRGIRAA EVVRALQFHV IGFVLVERHT DRSPEQHPSA EELWLAEPGS DAALAGALAT AVDADRLFAV ATEALVRSLL ADQ
|
| |