Gene Caci_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2280 
Symbol 
ID8333629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2586715 
End bp2587626 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content70% 
IMG OID644955433 
Producthypothetical protein 
Protein accessionYP_003113039 
Protein GI256391475 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.142793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTCGGT ACCGTTTCGT CTTCTCCTGG CGCTGGATCC GCCTGCATGT CCTGATCTGG 
CTGATCCTCA TCCCCTCCTT CATCGGCCTG GGGATGTGGC AGCGGAGCCG CTATCACGAG
CGCACCGCGG AGAACGCCGT CATCAGGACC GCCATGAACG CCCCACCGGT GCCGATCGAG
GGCGCCGACG CCGTGGGCGC CGCGGTGCCG CAGAAGGCCC GCTGGAAGCA GCTCACGCTG
GTCGGGACGT ACGACGCGGC GCACCAGTTC CTGGCCCGCA ACCGCCAGGA GAACGGCAAC
CCCGGCTTCT TCGTCATCAC GCCGATGACG CTCAGCGACG GTACGTCCGT CCTGATCAAC
CGGGGCTGGA TCGCGACCGT CAGCTCCGAT CAGCAGCAGT CGCCGGCGAT CCCGGCCGCG
CCGGCCGGCA CGGTCACCGT CACCGGGCGC CTGCAGCAGT CCGAGACCAA GGGCAACACC
GGCATCCGCG ACGTCACCGC GGGCCTGCCG GCCGGGCAGA TCAGCCTGAT CAACACCGAG
GCGCTGGCCG CCAAGACCGG TCTGCAGCTG CGCGGCGGCT ACGCCGAGGT GATCACCTCG
AAGCCGGCTG ACGCCTCGCA GATCACGGCG GTCGACGCGC CGTCCCTGGA CGAGGGACCG
TATTTGTCCT ACTGGTTCCA GTGGTGGCTG TTCTGCGTGA TCGCGGCCGG AGGCTGGATC
ACGATCATCC GGCGCGAAGC CCAGCACCGG GACCGCGAGG CCGCCGAGGC GGCCGAAGAA
GACGAGTACG AGGACGGAGA GGACGACGAC GAGCCCGTCG CGGAGGACGA GCCGGACACA
GAGGACGAAG ACGCGGCCGC CACTCCGACC ACCGCTACCG CCACAGCTAC CGCTACCGCG
CCAGCGCCCT GA
 
Protein sequence
MSRYRFVFSW RWIRLHVLIW LILIPSFIGL GMWQRSRYHE RTAENAVIRT AMNAPPVPIE 
GADAVGAAVP QKARWKQLTL VGTYDAAHQF LARNRQENGN PGFFVITPMT LSDGTSVLIN
RGWIATVSSD QQQSPAIPAA PAGTVTVTGR LQQSETKGNT GIRDVTAGLP AGQISLINTE
ALAAKTGLQL RGGYAEVITS KPADASQITA VDAPSLDEGP YLSYWFQWWL FCVIAAGGWI
TIIRREAQHR DREAAEAAEE DEYEDGEDDD EPVAEDEPDT EDEDAAATPT TATATATATA
PAP