Gene Caci_2268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2268 
Symbol 
ID8333617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2574404 
End bp2574895 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content66% 
IMG OID644955421 
ProductSUF system FeS assembly protein, NifU family 
Protein accessionYP_003113027 
Protein GI256391463 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01994] SUF system FeS assembly protein, NifU family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.794805 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTGG AATCGATGTA CCAGGAGATC ATCCTGGACC ACTACCGGCA CCCGCACCAC 
AAGGGGCTGC GGGAGCCGTT CGCCTCACAG GTGCACCACG TCAATCCGAC GTGCGGCGAC
GAGGTGACCA TGCGCGTGGA CCTCCAGGGC GACGTGATCA GCGACATCTC GTACGAGTCC
CAGGGCTGCT CGATCAGCCA GGCCTCGGCC TCGGTCATGG CGGACCTGCT GATCGGCAAG
TCGGTCGGCC AGGCCCGCGA GGTCCAGGAG ACCTTCCTGC GGCTGATGCA GTCCAAGCTG
GAGGGCCCGG AGTTCGCCGA GGAGCACGAG GAGGTGCTGG AGGACGCCGT GGCGTTCGCC
GGCGTCGCCA AGTACCCCGG GCGTGTGAAG TGCGCGCTGC TGTCGTGGAT GGCGTGGAAG
GACGCGACCG CGCAGGCGCT GGCAGACTCG GAGAGCAGTG TCGGATACGA AGGCAAGGGT
GTGAAGGCAT GA
 
Protein sequence
MQLESMYQEI ILDHYRHPHH KGLREPFASQ VHHVNPTCGD EVTMRVDLQG DVISDISYES 
QGCSISQASA SVMADLLIGK SVGQAREVQE TFLRLMQSKL EGPEFAEEHE EVLEDAVAFA
GVAKYPGRVK CALLSWMAWK DATAQALADS ESSVGYEGKG VKA