| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2247 |
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| Symbol | |
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| ID | 8333596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2550576 |
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| End bp | 2551562 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644955400 |
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| Product | protoheme IX farnesyltransferase |
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| Protein accession | YP_003113006 |
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| Protein GI | 256391442 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.000151822 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGGACG GGCTTTTGAC CACGGTCGAG ACTCCCCCGG CCACGGCTCC GTCCAGGACC
GCCGCTCCTT CGGTGGAGTC TGCGGCCGGG GAGCGCGGCG GGCACGCGAC GGCAGTCCTC
AAGGCGTACG TCGCCTTGAC CAAGCCGCGC ATCATCGAGC TGCTGCTCGT CACCACCATC
CCGGTGATGT TCCTCGCGCT GCGCCATGTG CCGGGGCTGT GGCCGGTCGT CGCGGTGACG
GTCGGCGGCT ACCTGTCCGC CGGCAGCGCC AACGCGCTGA ACTGCTACGT GGACCGCGAC
ATCGACGCCG AGATGCGCCG TACGCGCCGC CGTCCGGTCC CGGCCGCCTC GGTGACGCCG
CAGAACGCTC TGGTGTTCGG GCTCGTGCTC GGGGTCGTCT CCACGCTGTG GCTGGGCCTG
GCGGTGAACT GGCTGTCCTC GGGCTTGGCG CTCGCGGCGA ACGCCTTCTA CGTGCTCGTC
TACACGATGG TGCTCAAGCG GCGCACGCCG CAGAACATCG TCTGGGGCGG CGCGGCCGGC
TGCTTCCCGG CCCTGATCGG CTGGACCGCC GCCACCGACC GGCTGGCGTG GGCGCCGGTG
GTGCTGTTCA TGGTCGTGTT CCTGTGGACG CCGCCGCACT TTTGGGCGCT GGCTATCCGC
TACCGCGAGG ACTACGCGGC GGCGAACGTG CCGATGCTGC CGGTCGTGGC GCCGGCCCGC
GAGGTGACCA AGCAGATCGT CTGGTACTCC TACGCGACCG TGGCGTGCTC CCTGCTGCTG
TGGCCGATCG GGCACACCGG CCTGGTCTAC CCGATCGCCG CGGCGGTGCT CGGCGTGGTG
TTCCTGGTCG AGGCGCACCG GCTGGACGCG CGGGCGCGCT CGGGCAAGGA CGGCGTGGAG
CTGCTGCCGA TGCGGCTGTT CCACTTCTCG AACATGTACT TGGCGCTGCT GTTCGTGGCC
GCCGCGGTGA GTCCGCTGGT CCACTGA
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| Protein sequence | MEDGLLTTVE TPPATAPSRT AAPSVESAAG ERGGHATAVL KAYVALTKPR IIELLLVTTI
PVMFLALRHV PGLWPVVAVT VGGYLSAGSA NALNCYVDRD IDAEMRRTRR RPVPAASVTP
QNALVFGLVL GVVSTLWLGL AVNWLSSGLA LAANAFYVLV YTMVLKRRTP QNIVWGGAAG
CFPALIGWTA ATDRLAWAPV VLFMVVFLWT PPHFWALAIR YREDYAAANV PMLPVVAPAR
EVTKQIVWYS YATVACSLLL WPIGHTGLVY PIAAAVLGVV FLVEAHRLDA RARSGKDGVE
LLPMRLFHFS NMYLALLFVA AAVSPLVH
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