| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2235 |
|---|
| Symbol | |
|---|
| ID | 8333584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 2537038 |
|---|
| End bp | 2537595 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644955388 |
|---|
| Product | Appr-1-p processing domain protein |
|---|
| Protein accession | YP_003112994 |
|---|
| Protein GI | 256391430 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00772619 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00000296103 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAGC CGCAACGCCA ATCCCCGCCG CCACCACCCC AGTCCCACCC CCGCATCACC
CTGATCCGCG GCGACATCAC CAAGCAGCAC GCGGACGCAA TCGTGAACGC GGCCAACTCC
TCCCTACTCG GCGGCGGCGG AGTCGACGGA GCCATCCACC GCGCAGGCGG CCCAGAGATC
CTCGAGGCCT GCCGCGCACT CCGCGCATCG CACTACGGCC GCGGCCTCCC CACCGGCCAG
GCCGTCGCCA CCACCGCCGG CCGCCTCCCG GCCCACTGGG TCATCCACAC CGTCGGCCCG
GTCTACTCGC CGAACGACGA CCGCTCCGCA CTCCTGACCG CCTGCCACAC CAACTCACTC
GCCGTCGCAG ACACCCTCGG CGCGAAGACA ATCGCGTTCC CGGCCATCTC CACCGGCATC
TATGGCTGGC CCATCGCCGA CGCCGCACAT ATCGCCATCG CCGCAATCAC CACCACGGCC
ACCAACGTCA AGGAAGTCCG CTTCGTGCTC TTCGACGACG CCGCCTACGA AGCCTTCCTA
CGCGCCACCC AGCCCTAA
|
|---|
| Protein sequence | MPEPQRQSPP PPPQSHPRIT LIRGDITKQH ADAIVNAANS SLLGGGGVDG AIHRAGGPEI
LEACRALRAS HYGRGLPTGQ AVATTAGRLP AHWVIHTVGP VYSPNDDRSA LLTACHTNSL
AVADTLGAKT IAFPAISTGI YGWPIADAAH IAIAAITTTA TNVKEVRFVL FDDAAYEAFL
RATQP
|
|---|
| |