| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2230 |
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| Symbol | thrS |
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| ID | 8333579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2531509 |
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| End bp | 2533509 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644955384 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_003112990 |
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| Protein GI | 256391426 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0883238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00000834751 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCCGACT TCGCAGTGAC AATCGCCGAC GGCCCCGATA GGGACGAGCG GACGGTCACG
GTCGGCACGA CGCTGGCGGA CCTGTTCGCC GGCAACCGCT CCGTCGTCGC CGCCCGCCTG
ACCGATCCCA CCGGGACCCG TCTGGTCGAC CTGGCGACCC TGGCCAAGGC CGGCGACGTG
GTCGAACCGG TCGCCGCCGA CTCTGAGGAC GGCCGCGCGA TCATCCGGCA CTCCACCGCG
CACGTGCTGG CCCAGGCGGT GCAGCAGGCG TTCCCGGACG CCAAGCTGGG CATCGGCCCG
CCGATCCGCA ACGGCTTCTA CTACGACTTC GACGTCGAGA AGCCGTTCAC GCCCGAGGAC
CTGAAGGCCC TCGAGAGCCG GATGCAGACG ATCATCAAGC AGGGGCAGCT GTTCTCCCGG
CGTGCGGTCA CCGACGAGGA CGCCCGCGAG GAGCTCGCTG CCGAGCCCTA CAAGCTGGAG
CTGATCGGGC TCAAGGGCAA GGCCTCCTCT GATGACGCCG GCGAGGGCGT GGACGTCGAG
GTCGGTGCGG GCGAGCTGAC GATCTACGAT AACCTCGACG CCAAGTCCGG CGACCTGTGC
TGGAAGGACC TGTGCCGCGG CCCGCACGTG CCCAGCACTC GGTTCATTCC GGCGTTCAAG
CTGATGCGCT CTGCGGCCGC CTATTGGCGC GGCAGTGAGA AGAACCCGCA GCTGCAGCGC
ATCTACGGGA CCGCTTGGGA GACGCGGGAC GCGCTCAAGG CGCACTTGGA GTTCCTGGCC
GAGGCGGAGA AGCGTGACCA CCGCAAGATC GGTGCGGAGC TGGACCTGTT CTCCTTCCCT
GACGAACTCG GTAGCGGTCT ACCTGTGTTC CATCCCAAGG GCGGCACCAT TCGTCGGGTC
ATGGAGGACT ACTCCCGGAA GCGGCACGAA GAGGCGGGGT ACGAGTTCGT CAACACTCCG
CACATCACTA AGGGGAACCT GTACGAGATC TCCGGGCACC TCGACTGGTA CAAGGACGGG
ATGTTCCCGC CCATGGTGCT GGACGAGGGA CACGGCAAGC AGGAGTACTA CCTGAAGCCG
ATGAACTGCC CGATGCACAA CCTGATCTAC CGGGCTCGCG GGAAGTCCTA CCGCGACCTG
CCGCTGCGGC TGTTCGAGTT CGGCACTGTG TACCGCTATG AGAAGTCCGG TGTGGTGCAC
GGACTGACCC GAGTCCGTGG ACTCACGCAG GACGACGCGC ACATCTACTG CACACGTGAG
CAGATGCGCG ACGAACTCGT CAGCCTGCTG CGGTTCGTGC TGGACCTGCT GCGCGACTAC
GGACTGAACG ACTTCTACCT GGAGCTGTCC ACCAAGGATC CGGAGAAGTA CGTCGGTACT
GACGAGGAGT GGGAACTCGC TACGGACACC CTGCGCGAGG TCGCTGAGGG GGAAGACCTG
GAACTGGTCA TGGACCCGGG CGGCGCGGCG TTCTACGGCC CGAAGATCTC GGTGCAGGCG
CGCGACGCCA TCGGCCGGAC CTGGCAGATG TCGACGATTC AGCTGGACTT CCAGCTGCCG
CAGCGCTTCG ACCTGGAGTA CCAGGCGGCT GACGGGTCGC GGCAGCGGCC GATCATGATC
CACCGCGCGC TGTTCGGCTC GATCGAGCGC TTCTTCGGGG TGCTGACCGA GCACTATGCC
GGGGCGTTCC CGGCCTGGCT GGCGCCGGTG CAGGTGGTCG GGATCCCGAT CACCGACGCG
CACGTGCCGT ATCTGGAGCT GGTGGCCTCC AAGCTGCGTG CCGAGGGTGT CCGGGTCGAG
ATCGACTCCT CGGACGACCG GATGCAGAAG AAGATCCGCA ACGCGCAGAA GCAGAAGGTT
CCCTACATGC TGCTGGCGGG TGACGACGAT GTGGCGAAGG CCGCAGTTTC GTTCCGGTAC
CGCAGTGGGG AGCAGAACAA CGGGGTGCCG GTCGACGAGG CCGTCGCCGA GATCGTGAAG
GCGGTGCGGG AGCGGATCTG A
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| Protein sequence | MSDFAVTIAD GPDRDERTVT VGTTLADLFA GNRSVVAARL TDPTGTRLVD LATLAKAGDV
VEPVAADSED GRAIIRHSTA HVLAQAVQQA FPDAKLGIGP PIRNGFYYDF DVEKPFTPED
LKALESRMQT IIKQGQLFSR RAVTDEDARE ELAAEPYKLE LIGLKGKASS DDAGEGVDVE
VGAGELTIYD NLDAKSGDLC WKDLCRGPHV PSTRFIPAFK LMRSAAAYWR GSEKNPQLQR
IYGTAWETRD ALKAHLEFLA EAEKRDHRKI GAELDLFSFP DELGSGLPVF HPKGGTIRRV
MEDYSRKRHE EAGYEFVNTP HITKGNLYEI SGHLDWYKDG MFPPMVLDEG HGKQEYYLKP
MNCPMHNLIY RARGKSYRDL PLRLFEFGTV YRYEKSGVVH GLTRVRGLTQ DDAHIYCTRE
QMRDELVSLL RFVLDLLRDY GLNDFYLELS TKDPEKYVGT DEEWELATDT LREVAEGEDL
ELVMDPGGAA FYGPKISVQA RDAIGRTWQM STIQLDFQLP QRFDLEYQAA DGSRQRPIMI
HRALFGSIER FFGVLTEHYA GAFPAWLAPV QVVGIPITDA HVPYLELVAS KLRAEGVRVE
IDSSDDRMQK KIRNAQKQKV PYMLLAGDDD VAKAAVSFRY RSGEQNNGVP VDEAVAEIVK
AVRERI
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