| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2219 |
|---|
| Symbol | |
|---|
| ID | 8333565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 2518714 |
|---|
| End bp | 2519760 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644955370 |
|---|
| Product | Chorismate binding-like protein |
|---|
| Protein accession | YP_003112979 |
|---|
| Protein GI | 256391415 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0147] Anthranilate/para-aminobenzoate synthases component I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.294464 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.00136652 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCCCTCCC CTGCTCGCCG CCCGCCTCCG ATATCCGACC CCGAGCCGCT GGCCCACTTC
GCCGGCCGAC TCGCGACCGG GCTGCGCGAC GTTACCTCGG ACCTGAGCGC CCTGGATTCC
TCCGGCTTCT GGGCCGTCGT GGGCACCTAC GAAGGCGATT GGACCCTGGC GCGCTTCGAC
GACGTCCGGG ACGCCCCGCT CCCCTCGCCA AGCACGCCCT GGATCGGTCC GGACCGCGAC
GCGTGGATCT CCTCCATGGA TCAGGGCGCA TACGTGGGAG CTGTCAAAGC CATCCGCGAC
GAGATCGCCG CCGGCGAGGT CTACCAGGTG AACCTCTGCC GCGTCCTGTC CGCGCCGATC
GCTTCGCAGG CCGAACCCCT CGCCCTCGCC GCGCGCCTAC GCACGGGGAA CCCCGCTCCG
TACGCCGGTC TGGTCAACGT CCCCGGCACC CGCGTGGTGA CCGCCTCCCC CGAGCTCTTC
CTGCGCCGCG ACGGCCGCAC CGTCACCTCC GAGCCCATCA AGGGCACCGC GCGGACCGAG
GAGGAATTTC TCCCGAAGGA CACCGCCGAG AACATCATGA TCGTCGACCT GGTCCGCAAC
GACCTGGCGC GGGTCGCCGA GATCGGCTCC GTCGAGGTCC CCGCGCTGCT GCGTGTCGAG
CCGCATCCCG GGCTCGTGCA CCTGGTCTCG ACCGTGACCG CCGAGCTGAC CGCCGATGTG
GGCTGGCTAG AGCTGGTCGC GGCGACCTTC CCTGCGGGCT CCATCACCGG GGCGCCGAAG
AGCAGCGCGT TGCGCATCAT CGACGAGCTG GAGAACGCGC CGCGCGGTCC GTATTGCGGT
GCCGTCGGGT GGGTGGACGC CGATCGTGGT GTCGGCGAGC TGGCGGTGGG CATCCGTACG
TTCTGGTGGC AGGACGACCG CCTGTGTTTC GGCACCGGTG CCGGCATCAC GTGGGGGTCG
GATCCGCAGG GAGAATGGGA CGAGACCGAG CTCAAGGCCG CGCGGCTGCT GGCGGTCGCG
TCGGGACCGC GGCCGGCCGC GCAGTGA
|
|---|
| Protein sequence | MPSPARRPPP ISDPEPLAHF AGRLATGLRD VTSDLSALDS SGFWAVVGTY EGDWTLARFD
DVRDAPLPSP STPWIGPDRD AWISSMDQGA YVGAVKAIRD EIAAGEVYQV NLCRVLSAPI
ASQAEPLALA ARLRTGNPAP YAGLVNVPGT RVVTASPELF LRRDGRTVTS EPIKGTARTE
EEFLPKDTAE NIMIVDLVRN DLARVAEIGS VEVPALLRVE PHPGLVHLVS TVTAELTADV
GWLELVAATF PAGSITGAPK SSALRIIDEL ENAPRGPYCG AVGWVDADRG VGELAVGIRT
FWWQDDRLCF GTGAGITWGS DPQGEWDETE LKAARLLAVA SGPRPAAQ
|
|---|
| |