| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2213 |
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| Symbol | |
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| ID | 8333558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 2509702 |
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| End bp | 2513634 |
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| Gene Length | 3933 bp |
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| Protein Length | 1310 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644955363 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_003112973 |
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| Protein GI | 256391409 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.158033 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTCTC AGCTCAAGAC GGCTCCGCTC GCCGAGCTCA CCGCTCGCCT CACGGAGTTG
ACACCGCATG ACCGCCGCCG CCTGTCGCGC CGCATCGACG GCGCCCGCCG CATCCGCAAC
CCCCAGGCAC TGCAAGCGGT GGCCGCGGAG ATCGAGGCCG AGATCCAGGC CGCCTCGGGG
CGCGCCCAAG CCCGCAGGGC GAGCATCCCG AAGATCACAT ATCCGGAGAA CCTGCCGGTC
AGCGCCCGCA AGGACGATAT CGCCGCGGCG ATCCGGGACC ACCAGGTCGT GGTGATCGCC
GGCGAGACCG GGTCGGGCAA GACCACCCAG ATCCCGAAGA TCTGCCTGGA GCTGGGCCGC
GGCGTCGCCG GACTGATCGG GCACACCCAG CCTCGCCGGC TGGCCGCCCG CACCGTCGCC
GAGCGCATCG CCGAGGAGCT GGGGCAGTCG CTGGGCGAGT CCGTCGGCTA CAAGGTCCGC
TTCACCGACC ACTCCAGCGA CAACACGCTG GTCAAGCTGA TGACCGACGG CATCCTGCTG
GCCGAGATCC AGCAGGACCG GACGCTGAGC CGCTACGACA CGATCATCAT CGACGAGGCC
CACGAGCGGT CGCTGAACAT CGACTTCCTG CTCGGCTACC TCAAGAACCT GCTGCCGCGC
CGCCCCGATC TGAAGCTCAT CATCACCTCG GCGACCATCG ACCCGGAGCG CTTCGCCCGC
CACTTCGCCG ACCGGGACGG CAACGACGCC CCGATCGTTG AGGTTTCCGG CCGCACCTAT
CCGGTCGAGG TCCGCTATAG GCCGCTGCTC CTAGACGATC CCGAGGCAGA CGGCGACGCC
GCCGACCGTG ACCAGGTCCA AGCGATCAGC GACGCAGTGG ACGAACTCAG CCGAGAAGGT
CACGGCGACA TACTCGTGTT CCTATCTGGA GAGCGCGAGA TCCGCGATAC GGCGGATGCC
CTTAAGAAAC GCAACCTGCG CACCACAGAG ATCGTCCCCC TCTACGCGCG CCTCAGCACT
GCCGAGCAAC ACAAGGTCTT CGAACCCCAC GTCGGCCGCC GCGTCGTCCT GGCGACCAAC
GTCGCCGAGA CCAGTCTCAC CGTCCCAGGC ATCCGCTATG TGATCGACCC TGGTACCGCG
CGCATCTCCC GCTACAGCAA CCGCACCAAG GTGCAGCGCC TGCCGATCGA GCCGGTGTCG
CAGGCCTCGG CGAACCAGCG CAAGGGCCGC TGCGGCCGCA CCAGCGACGG AATCTGCATC
CGGTTGTACG CCGAGGATGA CTTCCTGTCC CGCCCGGAGT TCACCGAGCC GGAAGTCCTG
CGCACCTCCC TGGCGTCCGT CATCCTGCAG ATGAGCGCGC TGGGCCTCGG CGACGTCGCC
GCGTTCCCGT TCCTCGACCC GCCGGACGCC CGCAACATCC GCGACGGCGT GAACCTGCTC
CACGAGCTCG GCGCGCTCGA CCCCGAGGAG CAGGACCCCC GCAAGCGCCT GACGCCGGTC
GGCCGCAAGC TCGCGCAGCT CCCGGTGGAC CCCAAGCTCG GCCGCATGGT CCTGGAGGCG
GACCGCAACG GCGCGCTGAA GGAGATCCTC ATCATCGCCG CCGCGCTGTC CATCCAGGAC
CCGCGCGAGC GCCCCGCGGA CAAGCAGCAG GCGGCCGCCG AGAAGCACTC GCGCTTCAAG
GAGCAGGGCT CGGACTTCCT GGCGTGGCTG AAACTGTGGG ACTACATCAA GGAGCAGCAG
AAGGAGCTCT CCTCCAACCA GTTCCGCAAG CTCTGTAAGG CGGAGTTCCT GCATTACCTG
CGCATCCGCG AGTGGCAGGA CGTTCACAGC CAGCTCAAGC AGATCGCCAA GCAACTGGAG
CTCACTCCGA ACGGCAGTGA GGCCGCACCC GACCAGATCC ATATCAGTCT GCTTAGCGGA
CTGCTGTCGC ATATCGGCCT TAAGGACACG GAGTCCTTCG AGTACATCGG CGCACGGAGT
GCGAAGTTCG CCATCTCCCC CGGTTCGGTT CTCTTCAAGA AGTCACCGCA GTGGGTCATG
GCCGCCGAAC TCGTGGAGAC GAGCCGCTTG TGGGGGCGCG TGGTCGCCAC CATCAAGCCG
GAATGGGCAG AGCCTCTAGC GCAGCACCTA GTGAAGCGCA CATATAGCGA ACCCCACTGG
GAGAAGTCCG CGGGCGCCGT CATGGCGTTC GAGAAGGTGA CGCTCTACGG GATCCCGATC
GTCGCCTCCC GCAAGGTGAA CTACGGCAGC ATCGACCCCG AGGTCGCGCG CGACTTGTTC
ATCCGCCACG CACTGGTCGA GGGCGACTGG CAGACGCACC ACAAGTTCTT CTCTGAGAAC
CGCAAACTGC TCGCCGAAGT CGAGGAGCTG GAAAACCGCG CGCGCCGCCG CGACATCCTG
GTCGACGACG AGACGTTGTA TGACTTCTAC GACGACCGAG TACCGGCCGA CGTGGTCTCC
GCCCGGCACT TCGACTCCTG GTGGAAGAAG ACCAGCCGGG AGCAGCCGGA CCTGCTGAGC
TTCGAGAAGT CGATGCTCAT CAACGACGGC GCGGGTGCCG TGGTGGAGCA GGACTACCCG
GACTCCTGGC GGCAGGGCCG GATGAAGTTC CGGCTGACCT ACCAGTTCGA ACCGGGTGCG
GACGCTGACG GCGTCACCGT TCATATCCCG CTGGCAGTCC TGAACCAGGT CGCACCCGAC
GGCTTCGACT GGCTGATCCC GGGCCTGCGC GAGGAACTGC TCACCGCGCT GATCAAGTCG
ATGCCCAAGC AGCTGCGGGT GAACTTCGTG CCGGCGCCGA ACTTCGCCCA GGCGCTGCGT
CGCAGTCTGA TCCCGAACGA GGGACAGCTG CTGGAGGCGA TCGCCCGCGA GTTGCGCGCG
GTCTCCGGGC ACCGGGTCGA GCCCGCGGAC TTCGACCTAC AGCGGGTCCC GGACCACCTG
AAGATGACTT TCCGGATCGT CGACGACAAG GGCCGCAAGC TCGCCGAAGG CAAGGACCTG
GAGGCGCTGA AGCTCCAGCT GAAGGTCAAG ACCCGCGACG TCATCAACGA CGCCGCCGAC
GGCCTGGCCC GCGAAGGGCT GAAGACCTGG AGCGTCGGCA CGCTGGAGAA GACCTTCGAG
CAGAAGCGGC GCGGGCTGAC GATGAAGGCG TACCCGGCGC TGGCCGACGC CGGCGACAGC
GTGGCGGTGC GGCTCTACGA CACCGCCGAG GACCAGCGCC GAGCCATGGC CGCAGGCACG
CGCCGGATGC TGCTGCTGAA CGTCAACTCG CCGATCAAGC ACATCAACGG CCGCCTGAGC
AACCCGGCCA AGCTCGCGCT AAGCCACAAT CCCTACGGCA ACGCCCTGGC CTTGCTCGAG
GACTGCGTCG CCTGCGCCGC CGACCGCCTG ATCGCCCTGA ACGGCGGCCC AGCGTGGGAC
GAGGCGAGCT ACCAGAAGCT GTTCGACGCA GTCCGCGCCG ACCTGGCGGA CACCTCGATG
CAGGTGGTGC AGACCGTCGA GCGCGTCCTG TCGGTCTGGC ACGAGGTGGA GCGCAAGCTC
AAGGCGACTA CCAGCCGCTC CCTGCTGACC TCGCTCGCCG ACGTCCGCGA GCAGCTCAGC
GGGCTGATCC ACAAGGGTTT CGTCGCCGAG ACCGGCTTCG ACCAGCTGCC GCACCTGGTC
CGCTATCTGC GGGCCGTGGA CCGCCGTCTG GACAAGCTGC CGGACAACCC GAACCAGGAC
CAGCTTCTGA TGTTCCAGAT CCACGACGTC CGCGACGAGT ACCAACTGCT GCTGGACCGG
CTGCCGGCGG GTCGGCGCGG CGACGCGGAT GTGCGGCGCG TCCGCTGGAT GATCGAGGAG
CTACGAGTCA GCCTGTTCGC CCAACAGCTC GGAACCCCCG AGACCGTGTC TGCCAAGCGG
ATCTACCGCG CGATCGATGC CATCGAGGGC TGA
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| Protein sequence | MDSQLKTAPL AELTARLTEL TPHDRRRLSR RIDGARRIRN PQALQAVAAE IEAEIQAASG
RAQARRASIP KITYPENLPV SARKDDIAAA IRDHQVVVIA GETGSGKTTQ IPKICLELGR
GVAGLIGHTQ PRRLAARTVA ERIAEELGQS LGESVGYKVR FTDHSSDNTL VKLMTDGILL
AEIQQDRTLS RYDTIIIDEA HERSLNIDFL LGYLKNLLPR RPDLKLIITS ATIDPERFAR
HFADRDGNDA PIVEVSGRTY PVEVRYRPLL LDDPEADGDA ADRDQVQAIS DAVDELSREG
HGDILVFLSG EREIRDTADA LKKRNLRTTE IVPLYARLST AEQHKVFEPH VGRRVVLATN
VAETSLTVPG IRYVIDPGTA RISRYSNRTK VQRLPIEPVS QASANQRKGR CGRTSDGICI
RLYAEDDFLS RPEFTEPEVL RTSLASVILQ MSALGLGDVA AFPFLDPPDA RNIRDGVNLL
HELGALDPEE QDPRKRLTPV GRKLAQLPVD PKLGRMVLEA DRNGALKEIL IIAAALSIQD
PRERPADKQQ AAAEKHSRFK EQGSDFLAWL KLWDYIKEQQ KELSSNQFRK LCKAEFLHYL
RIREWQDVHS QLKQIAKQLE LTPNGSEAAP DQIHISLLSG LLSHIGLKDT ESFEYIGARS
AKFAISPGSV LFKKSPQWVM AAELVETSRL WGRVVATIKP EWAEPLAQHL VKRTYSEPHW
EKSAGAVMAF EKVTLYGIPI VASRKVNYGS IDPEVARDLF IRHALVEGDW QTHHKFFSEN
RKLLAEVEEL ENRARRRDIL VDDETLYDFY DDRVPADVVS ARHFDSWWKK TSREQPDLLS
FEKSMLINDG AGAVVEQDYP DSWRQGRMKF RLTYQFEPGA DADGVTVHIP LAVLNQVAPD
GFDWLIPGLR EELLTALIKS MPKQLRVNFV PAPNFAQALR RSLIPNEGQL LEAIARELRA
VSGHRVEPAD FDLQRVPDHL KMTFRIVDDK GRKLAEGKDL EALKLQLKVK TRDVINDAAD
GLAREGLKTW SVGTLEKTFE QKRRGLTMKA YPALADAGDS VAVRLYDTAE DQRRAMAAGT
RRMLLLNVNS PIKHINGRLS NPAKLALSHN PYGNALALLE DCVACAADRL IALNGGPAWD
EASYQKLFDA VRADLADTSM QVVQTVERVL SVWHEVERKL KATTSRSLLT SLADVREQLS
GLIHKGFVAE TGFDQLPHLV RYLRAVDRRL DKLPDNPNQD QLLMFQIHDV RDEYQLLLDR
LPAGRRGDAD VRRVRWMIEE LRVSLFAQQL GTPETVSAKR IYRAIDAIEG
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