| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2211 |
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| Symbol | |
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| ID | 8333556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 2505851 |
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| End bp | 2508583 |
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| Gene Length | 2733 bp |
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| Protein Length | 910 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644955361 |
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| Product | FHA modulated ABC efflux pump with fused ATPase and integral membrane subunits |
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| Protein accession | YP_003112971 |
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| Protein GI | 256391407 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.913993 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCCAGC AACCGGAACA GGCCGCACCG CTGACCCTGC AGATCCTTCC CGACGGGAAC
GAGCGGGTCT TCGACGGAAC CCGCCGGGTC GTCATCGGCC GCGACCCCAA TCAGGCCGAC
GTGATCGTCG CCGAACCCCG GGCGTCCCGG ATCCACGCCA CGCTGACCGT CCAGGGCGGC
GCGTGGATTC TGGAGGACGC TTCCAGTCAG GGCACGTTCG TGCAGAACAC GCGCCTCACG
CAGCCGATGG TGCTGCCGGG ACCGGTGGTC GTGCGGCTCG GGCATCCGGT GGACGGCCAG
GAGGTGCGCC TGATCCCCGG CGCACGGCGA CCCAACCTGC CGCCACCCGG ACAGCAGCAG
GGCGGGGCGC GGCCCGGACC GCCGGGACCT GGGCCGGCGC AGGCGCCTTC GCCGCAAGGC
GGATTCCACC CGGGGCAGCA GCCATATCCG GGTCCGCAAG GACAGCAACC ACCGCACATG
CCTGGACAGC ACGCACCGCA AGCGCCGCAG GGATACCCCG GGCAGCAGCA CGCCCCTCAG
GGGCCCGGTG GTCCTGTCGG CGCTCCCATG GGCGCTCCCT TCGCGGGCGC TCACGCAGGC
GGCGCGACCA TCATCAACCC TCAGCTACAG CAGCAGCCGT GGGCGCAGCA GCCAGGCGCC
GCACCACAAG CCGCTCCGTA TATTCCCCAG CAGAGCCCCG CACAGCAGCC GCAGCAGCCG
CGCCTGGGTG AGTACACCGG CGTCTACCAG ACCTCGAACA CGCTGCGAAT AGGCCGCGAC
GCCACGAACG ACATCGTCCT GCACGACCTG CAAGCCTCGC GCTTCCACGC GGAGTTGCAG
TTCAAGGGCG GGCGCTTCGA GATCGTCGAT AAGGGCAGCC ACAACGGCAC GTACCTGAAC
GGTATGCGCG TCAACCGCGC GGAGGTCCGC GAGGGCGCGA TCATCGCGAT CGCCCGGCAT
CTACTGCGTT TCCACAACGG TGTACTCCAG GAGTTCGTCG ACACCGGCGG GATCACCTTC
TCCGCGGCGA ACCTCGGCGT GCTGGCCGGA CCGAAGGTCC TGCTGGACAA CGTGAGCTTC
GCCCTGGAGG GCGGCGACTT CCTGGCAGTA CTCGGCCCTA CAGGCGCCGG CAAGTCCACG
CTGATGAAGG CGCTGACGGG TAACCGTCCC GCCGACCGCG GTGCGGTCTT CTATAACGGA
CGCGACCTCT ATGCGAACTA CGCAGAGCTC CGCAACCGCG TCGGATACGT TCCGCAGGAT
GACATCCTCC ATCCGCAGCT GAAGGTCCGC GACGCCCTGC GCTATGCCGC GCAGCTCCGC
TTCCCGCCGG ACGTCCCGGC CGCCGAGCGC AATGCCCGCG TCGACGAGGT GATGGCCGAA
CTCGGTCTGA CCGAGCGCGG GGACCTGGCT GTGGAGAAGC TCTCCGGCGG TCAGCGCAAG
CGCACCTCTG TCGCGATCGA ACTCCTGACG CGCCCCAGCC TGTTGATCCT GGACGAACCG
ACCTCCGGGC TGGACCCGGG CTATGAGAAG TCGGTGATGG ACCTGCTGCG CAAGCTCGCC
GACGGCGGGC GCACGGTCAT CACCGTGACG CACAGCATCC AGAGCCTGGA CCGCTGCGAC
CGCATCCTGT TCCTGGCGCC CGGCGGGCAG ACCGCCTTCT TCGGCCCGCC GCCGGAGACC
CTGCAGTTCT TCAGCAGGAA CACCTATGCG GAGGTCTTCC AGGACCTGGA CCGCGCCGCA
CCCGGTTTCG CCCAGCACGC GTTCGCCGGT TCTCCGGCAG ACCAGCAGTA CGTGCAGGCT
CCGTTGGGCG CACAGCTGAA CAAGGTCAAC GGCGCGGCCA ACGCGCAGCA GGCCGCGACC
CCGGCGGCGA ACCCGCACTG GGGTCACCAG CTGTCCACGT TGTTCAAGCG GTTCAGCTCG
GTCGTATGGG CTGACAAGCG AAACAGCATG ATGCTGTTCC TGCAGGCGCC GATCCTGGGT
CTGCTGATGC TCGCGGTGCT GGGCTCCAAC GACCTGTCCT CCAAGGACCC GGTCGCCGCC
CACAAGGCCG GCTCGGTGCT GCTGGCGCTG GTGCTGGGCG CGACGTATCT CGGTGCCTCC
AACTCGATCC GCGAGATCGT CAAGGAGAGA CCGATCCTCA CTCGAGAGAG AGCGATCGGG
CTGTCGCCGT CGGCATATGT GCTGTCGAAG GTGATCCTGC TGGGCATGCT GACGGTCGCG
CAGGCCGCAG TCCTGGTGTT CCTCGGCATC GTGCGCCAGG GCGGACCCGA CGACGGCTCG
GTGATGTCTT CCGGGCAGTT CGAGTTGTTC TTCGACGTGG CGCTGGCCGG TCTGGCCGCG
ATGGCTCTGG GCCTGCTGAT CTCCGCCTTC GTGTCGAACG GCGACAAGGC GCTGACCATC
CTGCCGGTCA TCCTGTTCGC GGAGTTCCTG TTCACCGGCT CGGCGTTCCC GGTCAACAAG
ACCCCGGGTC TGGAGCAGGC CAGCTACCTG GCTTCGGCGA AGTGGGGCTA CTCGGCCGCC
GCCTCCACGG CGAACGCCGA CATCCTGCTC GGGACCGGCT GCAACGACAC GTTGCCGACC
GGACCGCTGC CCGGTGCGAA GTGTGACTCG ACGCAGGCAC ACAAGTCCGG TACCTGGTAC
GGCGACATGG CCGCACTCAG TGTGCTCACT GTGGTGTGCA TCGCCGGGGC GTGGCTGGCG
ATCCGACCGG TGGGACAGCC GAAACAAAAG TAA
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| Protein sequence | MSQQPEQAAP LTLQILPDGN ERVFDGTRRV VIGRDPNQAD VIVAEPRASR IHATLTVQGG
AWILEDASSQ GTFVQNTRLT QPMVLPGPVV VRLGHPVDGQ EVRLIPGARR PNLPPPGQQQ
GGARPGPPGP GPAQAPSPQG GFHPGQQPYP GPQGQQPPHM PGQHAPQAPQ GYPGQQHAPQ
GPGGPVGAPM GAPFAGAHAG GATIINPQLQ QQPWAQQPGA APQAAPYIPQ QSPAQQPQQP
RLGEYTGVYQ TSNTLRIGRD ATNDIVLHDL QASRFHAELQ FKGGRFEIVD KGSHNGTYLN
GMRVNRAEVR EGAIIAIARH LLRFHNGVLQ EFVDTGGITF SAANLGVLAG PKVLLDNVSF
ALEGGDFLAV LGPTGAGKST LMKALTGNRP ADRGAVFYNG RDLYANYAEL RNRVGYVPQD
DILHPQLKVR DALRYAAQLR FPPDVPAAER NARVDEVMAE LGLTERGDLA VEKLSGGQRK
RTSVAIELLT RPSLLILDEP TSGLDPGYEK SVMDLLRKLA DGGRTVITVT HSIQSLDRCD
RILFLAPGGQ TAFFGPPPET LQFFSRNTYA EVFQDLDRAA PGFAQHAFAG SPADQQYVQA
PLGAQLNKVN GAANAQQAAT PAANPHWGHQ LSTLFKRFSS VVWADKRNSM MLFLQAPILG
LLMLAVLGSN DLSSKDPVAA HKAGSVLLAL VLGATYLGAS NSIREIVKER PILTRERAIG
LSPSAYVLSK VILLGMLTVA QAAVLVFLGI VRQGGPDDGS VMSSGQFELF FDVALAGLAA
MALGLLISAF VSNGDKALTI LPVILFAEFL FTGSAFPVNK TPGLEQASYL ASAKWGYSAA
ASTANADILL GTGCNDTLPT GPLPGAKCDS TQAHKSGTWY GDMAALSVLT VVCIAGAWLA
IRPVGQPKQK
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