Gene Caci_2210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2210 
Symbol 
ID8333555 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2505161 
End bp2505724 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content69% 
IMG OID644955360 
Productputative signal transduction histidine kinase 
Protein accessionYP_003112970 
Protein GI256391406 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.70924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTG TACCGACGGC GGGGGAGCCG TTCCGAAACG GGACGAAGCG CGCCACTACG 
TGTGAGGTGA TGGAAGTGCT CGGGGTCGGG CGGGAGCCGA GATGCGGCTA CCGGATCACC
TTCGCTGTGC CCACGAAATC CGAGGGCGCG GCGGCGGCGC GCCGCGTGGC GCGCGAGGTC
TTCGTCGACT GGGGCCTGGA CCTCGACGAG ACGATGGTCG ACTCGGCGAT CGTGATCATC
AGCGAACTGG TCACCAACAC CGCCAAGCAC GCGGCGCTGT TGTGCCGCCA GGCGGAGGTG
ACACTGGCGC TGGAGTACGA CTGCCTGAGC GTGGCCGTCC ACGACCGCCA CCCGCATCGG
CCCAAGGCGT TGCTGAGTCC GCACCCCGAC GACAGCGGCG GCTGGGGACT GCAACTGGTG
CGCGACCTGA CCGCGGAGGT CGGCGGACGC ACCGAGGTGC CGGCCGATGA GGACGGCGGC
GGCAAGACGG TACGAGTCGA GTTGCCGCTG CGGGCGAACA ACAGGTACTG GGAGTACGAA
GAGAGCGCAG TCGGGGCGGC TTAA
 
Protein sequence
MATVPTAGEP FRNGTKRATT CEVMEVLGVG REPRCGYRIT FAVPTKSEGA AAARRVAREV 
FVDWGLDLDE TMVDSAIVII SELVTNTAKH AALLCRQAEV TLALEYDCLS VAVHDRHPHR
PKALLSPHPD DSGGWGLQLV RDLTAEVGGR TEVPADEDGG GKTVRVELPL RANNRYWEYE
ESAVGAA