Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2169 |
Symbol | |
ID | 8333514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2460848 |
End bp | 2461483 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644955319 |
Product | isochorismatase hydrolase |
Protein accession | YP_003112929 |
Protein GI | 256391365 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAAC GCGCCCTCAT CGTCATCGAC GTCCAGGAGT CCTTCCGGGT CCGCCCGCTC TGGCGGCTGA TCGACAACCC CGACATCGCC GACGACGTCA ACCGGCTGGT CGACCACGCC CGGGGGAACG GCGACCTGGT CGTCTGGGTC CTGCACCAGG AGCCCGGCAG CGGCGACGTC TTCGACCCCG CCTCCGGCCA CGTCCGCTAC CTGGACGGAC TGCGCGCGCC CGAGGACGGC GAGCCCGAGA TCCGCAAGAC CTCGCACAAC GCGTTCACCA CCACCAACCT GCAGCAGGTG CTCACCGAGC ACGGCGTCGG CGAGCTGGCG GTCTGCGGCA TCCGCACCGA GCAGTGCTGC GAGACCACCG CGCGCCTGGG CTCCGACCTG GGCTATCAGG TGACGTTCGT GGTCGACGCG ACCGCGACCA ACCCGATCGC GCACCCGGAC GCCCCGGCGG ACATCACCCC CGAGGAGCTG GTCGCCGACC CGCGCACGCT GCCCGCCGCC GCGGTCGTCG AGCGCACCGT CTTCGCTCTC GCGCACCGCT TCGCGACCAT CGCGACCGTG GACGAGGTCG TCGGCGCGGA CGCCTCGAAG CCGGCGCCGC AGCCGGCACC GGAGCCGGTA AGCTGA
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Protein sequence | MTQRALIVID VQESFRVRPL WRLIDNPDIA DDVNRLVDHA RGNGDLVVWV LHQEPGSGDV FDPASGHVRY LDGLRAPEDG EPEIRKTSHN AFTTTNLQQV LTEHGVGELA VCGIRTEQCC ETTARLGSDL GYQVTFVVDA TATNPIAHPD APADITPEEL VADPRTLPAA AVVERTVFAL AHRFATIATV DEVVGADASK PAPQPAPEPV S
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