Gene Caci_2169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2169 
Symbol 
ID8333514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2460848 
End bp2461483 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content72% 
IMG OID644955319 
Productisochorismatase hydrolase 
Protein accessionYP_003112929 
Protein GI256391365 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAC GCGCCCTCAT CGTCATCGAC GTCCAGGAGT CCTTCCGGGT CCGCCCGCTC 
TGGCGGCTGA TCGACAACCC CGACATCGCC GACGACGTCA ACCGGCTGGT CGACCACGCC
CGGGGGAACG GCGACCTGGT CGTCTGGGTC CTGCACCAGG AGCCCGGCAG CGGCGACGTC
TTCGACCCCG CCTCCGGCCA CGTCCGCTAC CTGGACGGAC TGCGCGCGCC CGAGGACGGC
GAGCCCGAGA TCCGCAAGAC CTCGCACAAC GCGTTCACCA CCACCAACCT GCAGCAGGTG
CTCACCGAGC ACGGCGTCGG CGAGCTGGCG GTCTGCGGCA TCCGCACCGA GCAGTGCTGC
GAGACCACCG CGCGCCTGGG CTCCGACCTG GGCTATCAGG TGACGTTCGT GGTCGACGCG
ACCGCGACCA ACCCGATCGC GCACCCGGAC GCCCCGGCGG ACATCACCCC CGAGGAGCTG
GTCGCCGACC CGCGCACGCT GCCCGCCGCC GCGGTCGTCG AGCGCACCGT CTTCGCTCTC
GCGCACCGCT TCGCGACCAT CGCGACCGTG GACGAGGTCG TCGGCGCGGA CGCCTCGAAG
CCGGCGCCGC AGCCGGCACC GGAGCCGGTA AGCTGA
 
Protein sequence
MTQRALIVID VQESFRVRPL WRLIDNPDIA DDVNRLVDHA RGNGDLVVWV LHQEPGSGDV 
FDPASGHVRY LDGLRAPEDG EPEIRKTSHN AFTTTNLQQV LTEHGVGELA VCGIRTEQCC
ETTARLGSDL GYQVTFVVDA TATNPIAHPD APADITPEEL VADPRTLPAA AVVERTVFAL
AHRFATIATV DEVVGADASK PAPQPAPEPV S