Gene Caci_2165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2165 
Symbol 
ID8333510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2457103 
End bp2457672 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content72% 
IMG OID644955315 
Productsecreted repeat of unknown function 
Protein accessionYP_003112925 
Protein GI256391361 
COG category[S] Function unknown 
COG ID[COG4315] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAAGC CGGGAATCCC TCCCACCGCG CGGGTCGCCG GGGTGGTGTC GGCGGTGGCG 
CTGCTGGCAC TGGCCTCGGC CTGCTCTTCC TCGTCGGGGA AGAGCAACAG TGCGTCCTCG
AGCGCCCCAC CGAGCTCGTC CAGCATGTCC GGCACCGCCG GTCCCACCAT CACCAGCGCC
TCGGCCAGTG TGAGCGGCGC GCAGACCATG GTGCTCACCG CACCGGACGG CCACACGTTG
TACTACTTCA CCCCGGACAC CGCCGGCGGC ATGCCGACCT GCACCGGCGC CTGCGCCTCG
GTCTGGCCGG GTCTGACCGC GACCAGTCCG ACGGCCGCCT CGGGCGTCAC CGGCAAGCTG
ACCGTCGTCA GCGGCCACGT GGTCTACAAC GGACACCCGC TGTACGAGTA CAGCGGTGAC
AGCGCTGCCG GACAGGCGAA GGGCGAAGGC ATCGGCGGTA CGTGGTACGT CGCCACACCG
ACTCTGGCCG TCGGCGCCGG ACCGGCGTCC ACCCCCGCGC CGTCCAGCTC CTCCACTTCC
GGTGGCGGCA GCGGCGGTGG CGGTTACTGA
 
Protein sequence
MVKPGIPPTA RVAGVVSAVA LLALASACSS SSGKSNSASS SAPPSSSSMS GTAGPTITSA 
SASVSGAQTM VLTAPDGHTL YYFTPDTAGG MPTCTGACAS VWPGLTATSP TAASGVTGKL
TVVSGHVVYN GHPLYEYSGD SAAGQAKGEG IGGTWYVATP TLAVGAGPAS TPAPSSSSTS
GGGSGGGGY