| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2156 |
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| Symbol | |
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| ID | 8333501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 2443734 |
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| End bp | 2445608 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644955306 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_003112916 |
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| Protein GI | 256391352 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.168386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCGA CCACGCCCCC CTACTACCCC GCGATCGACG ACCACGGTCT GCTCGGTGAC
CTGCGCACTT GCGCGCTGGT CGCCGGTGAC GGCGCCGTGG ACTGGTTCTG TCCCGGGCGG
TTCGACGCGC CGAGCGTCTT CGGCGCGCTG CTGGACCGGG AACGGGGCGG GGCGTTCCGG
ATCTGGGTCG AGGGCGCGGC CTCCAGCCAG TCCTATCTGC CGCGCAGCGC GGTGGTGGTG
ACGCGGTTCG AGAGCCCCGA CGGCGGGGTC GGCGAGATCG TCGATTTCAT GGTCCCGGAC
GAGGCGCGGG CCTCCTTCAC GCCGGGCACG ACGACCTTGT ACCGGATCGT GCGCGCGGTG
GCCGGCGACA TCCAGTTCTC GGTGGACTGC CGGCCGCGCT TCGACTACGG CCGCTCCTTC
GGCGAGCCCG TCGAGCTGGT GCGGCGCGGC GGCACGCAGG CCGCGGTCTT CTCCGGACCG
GACTGCACCC TGAGCCTGCT GTCGACCGCG CCGCTGGGCC TGGACGCGGA CTCCGGCAGC
GCGAGGGCCG AGGTCCTGCT CGGCGCCGGC GAGGCGGCCG CCTTCGTCCT GGTCGCCAGT
CTCGCCACGC CCGAGGACTG GGAGCCCGAC GTCGCCGCCG AGGTGGAGCG CGCGCTGGAG
GAAGCGCTCA TCTTCTGGCA CGGCTGGCTG TCGCAGAGCA CGTACCGCGG CCGCTGGGCG
GACCCCGTGC ACCGCTCGGC GATCACTCTC AAACTCCTGA CATACTCACC GACCGGGGCG
TTCCTCGCGG CGGCGACCAC CGGGCTGCCG GAGGAGATCG GCGGCTTCCG CAACTGGGAC
TACCGCTACA CCTGGATCCG CGACGGCTCC TTCAGCGCCC GGGCGCTGTC CGACCTCGGC
TTCCACGAGG AGGCCGAGGC CTTCGCGCGC TGGGTCACCG GCCGCCTCGC CGACGGCCCG
ACAAGCCTTG GCGAGCCGCT GCACATCATG TACCGCGTCG ACGGCACCGC GGACCTCCTG
GAGGAGGAGC TGCCGCACTG GGAGGGCTAC CGCCGCTCGG CGCCGGTCCG CATCGGCAAC
GGCGCGGCCG AGCAACTCCA GCTCGACATC TACGGCGAGT TCCTCTACTC CCTGGCCGGC
ACCGAGCACC TGCACAGCCC CGAGGGGCAG GCAGCGGTCG GTCGGCTGCT GGACTGGCTG
GTCGAGCACT GGGCCCGCCC GGACGAAGGC ATCTGGGAGA CCCGCGGCGG GCGCCGCGAC
TTCACCTACA GCCGCCTGAT GTGCTGGGCC GCCTTCGAAT ACGGACTGCG CATCGCCCCG
ACGCACGAGA ACGCGGGCAT GTGGGCCGTG ATGGCGCACT CGATCGCCGG CGAGATCCGC
ACCAAGGGCT GGGACGAGGA TCAGCAGGCT TACATCCAGA CCTACGGCGA CGCCGCCCTG
GACGCCTCGA TCCTGTTCAT GCCCATGGTC GGCTTCACAA CGCCGCACGA AGAACGCTGG
ACCGGCACCC TGAACGCGAT CGAACGCAGC CTGATCCACA ACGGCCTGTG CCACCGCTAC
CGCCTCAGCG AATTCAGCGA CGGCCTCGCC GGCGACGAGT CCAGCTTCGA CCTGTGCACC
ACCCTGTACC ACATCGCACT CGCCCAAAGC GGCGCCGTCG AGCAGGCGCA GAAACTCTTC
GAGGCCTTCC TCCGCCACGC CGGTCCCACC GGCCTGTTCG CCGAGGAACT GACCCCAGGC
GGCCAGCAAC TGGGGAACTA CCCGCAGGCG TTCACGCACC TCGGCGTGAT CTGGGCGGCG
CTGGCACTGG ATGAGGCGCT GGACAGGGTG GGGGACGGTT CTTCGGAGAG TCGCGGTGCG
GTAGCCCGGG GCTGA
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| Protein sequence | MTSTTPPYYP AIDDHGLLGD LRTCALVAGD GAVDWFCPGR FDAPSVFGAL LDRERGGAFR
IWVEGAASSQ SYLPRSAVVV TRFESPDGGV GEIVDFMVPD EARASFTPGT TTLYRIVRAV
AGDIQFSVDC RPRFDYGRSF GEPVELVRRG GTQAAVFSGP DCTLSLLSTA PLGLDADSGS
ARAEVLLGAG EAAAFVLVAS LATPEDWEPD VAAEVERALE EALIFWHGWL SQSTYRGRWA
DPVHRSAITL KLLTYSPTGA FLAAATTGLP EEIGGFRNWD YRYTWIRDGS FSARALSDLG
FHEEAEAFAR WVTGRLADGP TSLGEPLHIM YRVDGTADLL EEELPHWEGY RRSAPVRIGN
GAAEQLQLDI YGEFLYSLAG TEHLHSPEGQ AAVGRLLDWL VEHWARPDEG IWETRGGRRD
FTYSRLMCWA AFEYGLRIAP THENAGMWAV MAHSIAGEIR TKGWDEDQQA YIQTYGDAAL
DASILFMPMV GFTTPHEERW TGTLNAIERS LIHNGLCHRY RLSEFSDGLA GDESSFDLCT
TLYHIALAQS GAVEQAQKLF EAFLRHAGPT GLFAEELTPG GQQLGNYPQA FTHLGVIWAA
LALDEALDRV GDGSSESRGA VARG
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