Gene Caci_2143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2143 
Symbol 
ID8333488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2429250 
End bp2429843 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content74% 
IMG OID644955293 
Productprotein of unknown function DUF1349 
Protein accessionYP_003112903 
Protein GI256391339 
COG category[S] Function unknown 
COG ID[COG3506] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCACA CCACAGAGAC GATAGTCCCC TGGTCCGCCG GGTCCTGGCT GAACCCGCCG 
CCCGCGGTCC GTGAAGAGGG CGGCGACCTG GTCGTCACCG CCGCCGCCGA GTCGGACTTC
TGGCGCACCA CGAGCTACGG CTTCGTCCAC GACGACGGCC ACGCCCTGCT CACCGACTTC
CCCGCCGGCA GCGCGGTCGA GGTCTCCTTC CGGTGCGCGC TGACCGAGCA GTTCGACCAG
GCCGGCGTAC TGGTCCGGGT GGACGAGCAG ACCTGGACCA AGTCCGGCGT CGAGTTCGCG
GACGGCGCGC CGCAGCTCGG CGCCGTCGTC ACCCGCGGCA TGTCGGACTG GTCGACGGCG
CCGGTCCCGG AGTGGGCCGA CCGCGAGGTG ACCATCCGGG TCAGCCGCGC CGGCGACGCC
CTCACCGTGC GGGCCCGCTG CGAGGACGGT CCCTGGCGCC TGGTCCGCTT GGCGCCGCTG
GACCCGGACG CCGTCGCGCA GGCAGGTCCG GCGTGCTGCG CCCCGACCCG CGCCGGACTG
GACGTCCGCT TCACCAAGTT CACCATCGGC CCGGCGGACG AGTCGCTGCA CTGA
 
Protein sequence
MIHTTETIVP WSAGSWLNPP PAVREEGGDL VVTAAAESDF WRTTSYGFVH DDGHALLTDF 
PAGSAVEVSF RCALTEQFDQ AGVLVRVDEQ TWTKSGVEFA DGAPQLGAVV TRGMSDWSTA
PVPEWADREV TIRVSRAGDA LTVRARCEDG PWRLVRLAPL DPDAVAQAGP ACCAPTRAGL
DVRFTKFTIG PADESLH