| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2117 |
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| Symbol | |
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| ID | 8333462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 2401673 |
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| End bp | 2403382 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644955267 |
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| Product | TrkA-N domain protein |
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| Protein accession | YP_003112877 |
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| Protein GI | 256391313 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGACT TGTTCATCGT GGTGGGCGGG AACGCCTTGG CCAACAGGCT CACCGTCGAG
TTGACCCGGC AGTACGGCGT CCGCACGGCT GCGATCGTGC CGCCGCAGGA GACGCCGTAC
ACCGTCCAGA TCACCAAGGT GCTCGGCGCC GAGAACACCG TCGTCGACGC GCGCGTGTCC
GAAGAAGCGC TGCGCCGGGC CGGCATCGGC CAGGCGCAGG CGATCGCGTT CGTGGACGGC
GACGACCGGA CCAACATCCA CGCCGCCATG CGCGCCGCGG CCCTGCGCCC GGGTATCAGG
GTCGTGATCC GCATGTTCAA CCAGCGGCTC GGCGCGCACA TCGCGCAGCT GGTCGACAAC
TGCACGGTCC TGTCGGCCTC GGCGACCGCC GCGCCGGCGT TCGTCAACGC CGCGCTGCAG
CGCCCGCACT CGGTCAGCGC CGGCGGCCGG GCGCTGCGGG TCGCCGTCGG CCAGGACATC
GACATGCGGC AGACGCCGTT CCTGATCGCC GACGCCATCG ACCGCGACCG GCAGTCGGAC
ATCGAGGTGC TGCCGGTGGC GGCGGCGCGC AGCCGGACGC AGGAGTGGAT GCTGCTTCAG
GAGCGCTCGC CACGGCACGC CGCGTTGCAG TTCCTGGACG CCTCCGACGC GATCGTGGCC
GGAAACCTTT ACAAGGCCTC GCCGACAGCC CGTCTGCTGT GGCGCGCGTC GGACACCCTG
AAGTACTTCA CCAGCGCCAA ACTGCGCACG ATCCTGATCG CCGCGGTGGT CACGCTGCTG
GTGTCCTTCG CCGGGATCTG GTTGCTGGCG CGGCCGTTCG CCTGGGCCCT GTACGAGACG
TCGCTCGACG TGGCGGGGTC GGCGGTCCCC GATGTCTACG GCCAGCACAG CGCGGTCGGC
GGCGACCTGC AGCGGCTGTT CCAGGTCGCG ATCACGCTGT CCGGCATCGT GCTGATGCCG
GTGGTGACCG CGGTGTTCGT CGAGAGCACC GCGACCCGGC GCAACGTGCG CACCCGGCAG
CCGAGCACGG GACTGCGCGG GCACGTGGTC GTGGTCGGCC TCGGCAACGC GGGCACGCGG
GTCACGGCGC TGTTCCGGGA GCTCGGCGTG CCGGTGGTCG GCATCGAGCG CGACCCCGAG
GCCCGCGGGA TCGCCGCGGC ACGCGGGCTG GACGTGCCGG CGGTGGTCGG CGACCGGCCG
ATCGAGGACG CGCTGCGCCG GGCGCAGATC GGCCGGGCGC GCGCGGTCGT GGCGGTGACC
GGCGACGACG TGACCAACCT GGAGGCGGCG CTGGAGGCCC GCGCCATCAA CCCCGAGGTG
CGGGTCGTGG TGCGGCTGTT CGACGACGAC TTCGCCTCGC ACGTCTACAA GGAGTTCGGC
AACACCGCCT CCCGCTCGGT GTCCTACCTC GCGGCGCCGG CGTTCGCCGC CGCGATGATG
GGGCGCGAGG TGCTCGGGAC GCTGTCGGTG TATCGCAAGG TCCTGCTGAT CGCCGAGGTC
GTGGTCGAGA CCGGCTCGGA ATCGGCCGGG CGGGCGCAGC GTGACCTGGA TGAACCGGGG
CTGACGCGGG TACTGGCGGT GAAGCGGGCG GGAAGCACGG CGTTCGACTG GTCGGGAGCC
GACCGGAGCC GGGTTCTGCA AGAGGGTGAT CGGCTTATCC TGGCCGCGAC GCGTGCGGGT
TTCGGCAGTC TGGCCGGACG CGTCAGCTGA
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| Protein sequence | MGDLFIVVGG NALANRLTVE LTRQYGVRTA AIVPPQETPY TVQITKVLGA ENTVVDARVS
EEALRRAGIG QAQAIAFVDG DDRTNIHAAM RAAALRPGIR VVIRMFNQRL GAHIAQLVDN
CTVLSASATA APAFVNAALQ RPHSVSAGGR ALRVAVGQDI DMRQTPFLIA DAIDRDRQSD
IEVLPVAAAR SRTQEWMLLQ ERSPRHAALQ FLDASDAIVA GNLYKASPTA RLLWRASDTL
KYFTSAKLRT ILIAAVVTLL VSFAGIWLLA RPFAWALYET SLDVAGSAVP DVYGQHSAVG
GDLQRLFQVA ITLSGIVLMP VVTAVFVEST ATRRNVRTRQ PSTGLRGHVV VVGLGNAGTR
VTALFRELGV PVVGIERDPE ARGIAAARGL DVPAVVGDRP IEDALRRAQI GRARAVVAVT
GDDVTNLEAA LEARAINPEV RVVVRLFDDD FASHVYKEFG NTASRSVSYL AAPAFAAAMM
GREVLGTLSV YRKVLLIAEV VVETGSESAG RAQRDLDEPG LTRVLAVKRA GSTAFDWSGA
DRSRVLQEGD RLILAATRAG FGSLAGRVS
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