Gene Caci_2116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2116 
Symbol 
ID8333461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2401123 
End bp2401647 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content68% 
IMG OID644955266 
Producthypothetical protein 
Protein accessionYP_003112876 
Protein GI256391312 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA CCGCGGCAGG CGGACAAGGT TCCGGCACTG AGGGGTTCGC CCCGCCCGGC 
GATGGTTACG CGCCGCCTGG TTACGCGCCG CCCGGTTACG CACCGCCCCG TTACGCTCAG
CAGGACGCCG TACCGCCCGG CTACGCGTCG CCGACGCAGG ACATGGTCCC GGTGCAGCCG
ACGTTTCCCA CGTCCTTCTC AGCCGCGCCC CAGTACTTCG GACCGCAGCC TCCGCAGCTG
TATCCCGGCG GGTACTACGG ACCGCCGATG CTGCGGCCGC AGACCAGCGG CATGGCCGTC
GCGGGCATGG TGACCGGGAT TTGCAGCATG CTGCTTTTCT GGGCTCCGCT GCTGGCGCCG
GTTTTGGCGA TCATGGGGCT CGTCTTCAGC GGCATGGGGA TATCGCAGAG TTCGAGGCAG
GGGTGGACCG GCACGGGAAT GGCGATCGCC GGTCTGGTGT GTTCAGCGAT CACGGCGGTG
ATCTGGGTGC TGCTGGTGAT ATTCGTGGTG GCGCTGTTCG TGTGA
 
Protein sequence
MSDTAAGGQG SGTEGFAPPG DGYAPPGYAP PGYAPPRYAQ QDAVPPGYAS PTQDMVPVQP 
TFPTSFSAAP QYFGPQPPQL YPGGYYGPPM LRPQTSGMAV AGMVTGICSM LLFWAPLLAP
VLAIMGLVFS GMGISQSSRQ GWTGTGMAIA GLVCSAITAV IWVLLVIFVV ALFV