| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2111 |
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| Symbol | |
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| ID | 8333456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2395640 |
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| End bp | 2397307 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644955261 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003112871 |
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| Protein GI | 256391307 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCG AGACCCTCGC CGTCCAAGCC GTCCAAGCCG TCCCGGCCGC CGCATCCGGC
GCCCGGCGCA CCGCCTGGTG GCGCGACGCG GTGATCTACC AGGTCTACAT CCGCTCGTTC
GCCGACTCCG ACGCGGACGG GATCGGCGAC CTGCCGGGCA TCCGCTCCCG GCTGCCGTAC
CTGGCCGACC TCGGCGTGGA CGCGCTGTGG ATCACGCCGT TCTTCTCCTC GCCGATGGCC
GACTTCGGGT ACGACGTCGC CGACTACCGC GCCGTGGACC CGGTCTTCGG GGACCTGGAC
GACTTCCGGG CCCTGCTGAC CGACGCGCAC GCCCGCAGCC TGCGCGTGAT CGTCGACCTG
GTCCCGAACC ACACCTCGGA CCGGCACGCC TGGTTCGTGG AAGCGCTCGC GGCGCCGGAG
GGGAGCGCCG CCCGCGACCG CTACATCTTC CGCGAGGGCC GCGGCGCGCA CGGCGACCTG
CCGCCGAACG ACTGGGAGTC GGTCTTCGGC GGCCCGGCCT GGACCCGCAC GGTGAACCCC
GACGGCACGC CGGGACAGTG GTACCTGCAC CTGTTCGCGC CCGCGCAGCC GGACCTGAAC
TGGGACCTGC CCGAGGTGCG CTCGGAGTTC CTGGAGGTCC TGCGCTTCTG GCTGGACCTC
GGCGTCGACG GCTTCCGGAT CGACGTCGCG CACGGCATGG TCAAGGCGCC CGGGCTGCCG
GACGTCGGGC ACGCCGACCA CGTCGAGATG ATCGGCAACG CGGTCCTGCC CTTCTTCGAC
CAGGACGGCG TGCACGAGAT CTACCGCTCC TGGCGGCTGC TGCTGGACTC CTACGACGGC
GAGCGCATCG GCGTCGCCGA GGCGTGGGCG CCGACCCCGG AGCGGCTGGC GAACTACGTG
CGCCCCGACG AGCTGCACCA GGCGTTCAAC TTCGACTTCC TGGGCCGCCC GTTCGAAGCC
GCCTCCCTGC GCACCGCCAT CGACCACTCG CTGGCCACCG CCGGCTCGGT CGGCGCGCCC
TCGACGTGGG TGTTGTCGAA CCACGACATG AAGCGGCACG TGACCCGCTA CGGCGGCGGC
GCACGCGGCC TGGCCCGGGC CCGCGCCGCG GCGCTGCTGA TGCTGGCGCT GCCCGGCTCG
GCGTACATGT ACCAGGGCGA GGAGCTGGGA CTGCCGGAGG TGCTGGACAT CCCGGTGGAG
TTCCTGGTGG ACCCGCAGGG CATCCAGTCC GGCGACCCGT CCAAGGGCCG CGACGGCTGC
CGCGTGCCGC TGCCGTGGTC CGGCGAGGCG CCGACGTACG GCTTCGGCCC TGAGGGCTCC
ACCGCCTCAT GGCTCCCGGC GCCGGCATCC TGGGGCACGC TGTCGGTCGA GGCGGAGACC
GGCGACCCCG CCTCGATGCT GGAGCTCTAC CGCTCGGCAC TGACCCTGCG CCGCCAGCTC
CCCGACCTCG GCGCGGAGAC CGAAGACACC ACGCTGGTGT GGCTCCCCTC GCCCGACGGC
GTGCTGACCT TCCGGCGCGG CGACGGGTTC GTCTGCACGG TGAACACCGG ATCCACGCCG
GCGACGGTGC CCGTTCCGGG TACCTTGCTG CTGGCTTCCA CCGATATATC GGTGAGCGCC
GACAGCGTTG ACTTGCCCGC AGACTCGACC GCCTGGTGGC GGATCTAG
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| Protein sequence | MTTETLAVQA VQAVPAAASG ARRTAWWRDA VIYQVYIRSF ADSDADGIGD LPGIRSRLPY
LADLGVDALW ITPFFSSPMA DFGYDVADYR AVDPVFGDLD DFRALLTDAH ARSLRVIVDL
VPNHTSDRHA WFVEALAAPE GSAARDRYIF REGRGAHGDL PPNDWESVFG GPAWTRTVNP
DGTPGQWYLH LFAPAQPDLN WDLPEVRSEF LEVLRFWLDL GVDGFRIDVA HGMVKAPGLP
DVGHADHVEM IGNAVLPFFD QDGVHEIYRS WRLLLDSYDG ERIGVAEAWA PTPERLANYV
RPDELHQAFN FDFLGRPFEA ASLRTAIDHS LATAGSVGAP STWVLSNHDM KRHVTRYGGG
ARGLARARAA ALLMLALPGS AYMYQGEELG LPEVLDIPVE FLVDPQGIQS GDPSKGRDGC
RVPLPWSGEA PTYGFGPEGS TASWLPAPAS WGTLSVEAET GDPASMLELY RSALTLRRQL
PDLGAETEDT TLVWLPSPDG VLTFRRGDGF VCTVNTGSTP ATVPVPGTLL LASTDISVSA
DSVDLPADST AWWRI
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