Gene Caci_2103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2103 
Symbol 
ID8333448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2387255 
End bp2387764 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content70% 
IMG OID644955253 
ProductIsoprenylcysteine carboxyl methyltransferase 
Protein accessionYP_003112863 
Protein GI256391299 
COG category[S] Function unknown 
COG ID[COG1755] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTCT ATTACGCGCT GGTGATCGCC ACCTGCTGCG AACGGCTCGC CGAACTGGTC 
GTGGCCAAGC GGAACGCGGC CTGGAGCCTG GCGCGCGGCG GCGTGGAGAC CGGACGCGGG
CACTATCCGC CGATGGTCCT GCTGCACACC GGGCTGCTGG CCGGGTGTCT GGTCGAGCCG
GTCGTCGCGC ACCGGACGTT CGTGCCGGCG CTGGGAATCC CCATGCTGGT GCTCGCGGTC
GGCTCGCAAG GGTTGCGCTG GTGGTGCATC AAGACCCTGG GACCGCGGTG GAACACGCGG
GTCATCGTGG TGCCCGGCCT GCCGCTGGTG GATTCCGGGC CGTATCGGTG GTTCGCGCAT
CCGAACTACG TCGCGGTCGT GGTCGAGGGC TTCGCGCTGC CGCTGGCCGG ATCGGCGTGG
GTGACGGCGG CGGTGTTCAC GGTGCTGAAC GCCGCGCTGC TGACCGTCCG GCTGCGCTGC
GAGATCAGGG CTCTGTGTAC GACGTCCTAG
 
Protein sequence
MIFYYALVIA TCCERLAELV VAKRNAAWSL ARGGVETGRG HYPPMVLLHT GLLAGCLVEP 
VVAHRTFVPA LGIPMLVLAV GSQGLRWWCI KTLGPRWNTR VIVVPGLPLV DSGPYRWFAH
PNYVAVVVEG FALPLAGSAW VTAAVFTVLN AALLTVRLRC EIRALCTTS