Gene Caci_2094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2094 
Symbol 
ID8333438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2377888 
End bp2378628 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content70% 
IMG OID644955243 
ProductNmrA family protein 
Protein accessionYP_003112854 
Protein GI256391290 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG CTGTCATCGG CGGCAACGGG CTCATCGGGA CGCAGGTCGT GAAGATCCTG 
ACCGAGGGCG GGCACGAGGC GGTCGCGCAT TCGCGCGCCT CCGGCCTGGA CCTGTTGACC
GGGCAAGGAC TGCCCGAGGC GCTGACCGGC GCCGACGTCG TGATCAACCT GACGAACTCG
CCGACCTTTG ACGACGCCTC GCCCGCCTTC TTCCAGCAGT CGATGGACAA CCTGCTCGCC
GCCGCCGCGG CAGCCGGGGT CGGGCACGCG GTGATCCTCT CGATCGTCGG CGCCGAACTG
GTGCCGGACC TGGTCTACTA CCGCGCCAAG GTGCTCCAGG AGGACATCCT CAAGGCCGGT
CCCGTGCCGT ATTCGATCGT CCGGGCCACC CAGTTCTTCG AGTTCATGGA GGCGGCGATG
TCCTGGACCG CCGACGAGAA CGCCGTGCGC CTGCCGGCCA CGCTGATCCA GCCGATGGCC
GCGGCCGACG TGGCTCAGGC GGTGGCGGAG GTCAGCGTGG GCAGCCCGCT GGCCGGCACG
TGCAACATCG CCGGTCCCGA CGTCTTCACC CTCGCCGAAC TCGGCCGGAT CACGCTCATC
ACCCGCGGCG ACCCGCGCCC GGTCGTCGTC GACGAGAGCG CCGGACTGTT CGCCGCCGCG
TCGGGCGACG CCCTGATCGC CAAGGACGGG GACGACGCCA TCATCGCGCC GACCACCTAT
CAGGACTGGC TCGCCCGCTG A
 
Protein sequence
MKIAVIGGNG LIGTQVVKIL TEGGHEAVAH SRASGLDLLT GQGLPEALTG ADVVINLTNS 
PTFDDASPAF FQQSMDNLLA AAAAAGVGHA VILSIVGAEL VPDLVYYRAK VLQEDILKAG
PVPYSIVRAT QFFEFMEAAM SWTADENAVR LPATLIQPMA AADVAQAVAE VSVGSPLAGT
CNIAGPDVFT LAELGRITLI TRGDPRPVVV DESAGLFAAA SGDALIAKDG DDAIIAPTTY
QDWLAR