Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2090 |
Symbol | |
ID | 8333434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 2373486 |
End bp | 2374001 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644955239 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003112850 |
Protein GI | 256391286 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGAAG CCGAAGACGA GTTCCGGGAA TTCGCGGTCG CGGTCCAGGG GCATTTGCGG CGCAGTGCGT ATCTGCTGTG CGGGGACTGG CATCTGGCCG AGGACATCGT CCAGAGTGCG TTCGTCAAGA TCTTTCGGGT CTGGCGGCGG GTGCGGAAGG TCGAGAACCA GCTCGGGTAC GCCCGGCAGG TGGTCTACCG GTGCTTCCTG GACCAGTACC GCAAGGACAA GAAGCAGCTT CCCACGGTGC CGATCGCGGG GGCGGCGGAC CATGTGCTGG TGGAGTCAGT GCTCGACGAT TCCTCCTTCG CGGGGGTCGT CGTGGAGGCG CTGGCTGAGC TGCCGCCGAG GGCGCGCGCC GTGATCGTGC TCCGGTTCTG GGAGGACATG AGCGTCGAGC AGGCCGCCAC GGTGCTGGGT GTGACGACGG GGACGGTGAA GAGCCAGACG TCGCGGGCCG TCGCACAGCT GCGCGGACGT CTGGCGGCCG GGCTGAACGA ACAGGCTCGC TGGTGA
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Protein sequence | MSEAEDEFRE FAVAVQGHLR RSAYLLCGDW HLAEDIVQSA FVKIFRVWRR VRKVENQLGY ARQVVYRCFL DQYRKDKKQL PTVPIAGAAD HVLVESVLDD SSFAGVVVEA LAELPPRARA VIVLRFWEDM SVEQAATVLG VTTGTVKSQT SRAVAQLRGR LAAGLNEQAR W
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