| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2067 |
|---|
| Symbol | |
|---|
| ID | 8333411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 2341265 |
|---|
| End bp | 2342188 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 644955216 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_003112827 |
|---|
| Protein GI | 256391263 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCCA TGCAATTGGA TTTGAACCTG CTCGCCGCCC TCGACGCTCT GCTCGAAGAG
GGCAGCGTGG CCGGGGCAGC CGACCGCCTG CACGTCACCG CTCCGGCGAT GAGCCGCAGC
CTGGGCCGGA TCCGGCGGAG CACCGGCGAC CAGATCCTGG TGCGCACCGG CCGCACGATG
ACCCCGACGC CCTACGCAAT CGCCGTCCGC GCGCAGGTGC ACGCGCTGTT GCAGCAGGTG
CAGGGCGTGC TGGCGCCGAG TCACGAGCTG GACCTGACCA CCTTGGAGCG CACCTTCACG
CTGCGCTGGC ACGACTCGCT CGTCGCGCTC GGCGGCGCGG CGCTGCTGGC GGCGGTGCGC
GAGCAGGCGC CCGGCGTGCG GCTGCGGTTC ATCGCGGAGT CCAGCACCGA CAGCCCGGGG
CTGCGGCGCG GCGAGGTCGA TCTCGAGGCG AACGCGAACC CGCCGGCCGC GGCGGACGTC
CGCGCCGAGA AGGTGGCCGA GACCGCGCAG GTGGTCGTGG TCCGACCCGG TCATCGGCTC
GCTGGCGAGC CGGCGCAGCC GATGACCGCC GAGCAGTACG CCGCGGCCGA CCACGTCGCC
GTCTCGCGCC GGGGCAATCT CAGCGGCACG ATCGACGACG CCCTCGCGAG GCTCGGGCTC
GCACGCCGTG TCGTGGCGAC CGCGCCGTCG GAGGCAACCG CGCTGGAGTT CGTCCGCGAC
TCCGACCTCG TGGTCACCGC GCCGCAGGCC ACCACCCGCC GGGCGAGCGC CGACCTCGGG
CTGGTCGTGC TCCCGCTGCC GCTCGACCTG CCGCCCGCGT CGGTGTACTT GTCCTGGCAT
CAACGCTATG ACACCGATCG AGCGCACGCC TGGCTGCGGG AACTGGCGCG CACCGCGCTG
GATGCTCCCA ACCGCCGCGC ATGA
|
|---|
| Protein sequence | MTPMQLDLNL LAALDALLEE GSVAGAADRL HVTAPAMSRS LGRIRRSTGD QILVRTGRTM
TPTPYAIAVR AQVHALLQQV QGVLAPSHEL DLTTLERTFT LRWHDSLVAL GGAALLAAVR
EQAPGVRLRF IAESSTDSPG LRRGEVDLEA NANPPAAADV RAEKVAETAQ VVVVRPGHRL
AGEPAQPMTA EQYAAADHVA VSRRGNLSGT IDDALARLGL ARRVVATAPS EATALEFVRD
SDLVVTAPQA TTRRASADLG LVVLPLPLDL PPASVYLSWH QRYDTDRAHA WLRELARTAL
DAPNRRA
|
|---|
| |