| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2059 |
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| Symbol | |
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| ID | 8333403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 2330650 |
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| End bp | 2332092 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644955208 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003112819 |
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| Protein GI | 256391255 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGA CTTCTTCCGG TTCTGCTTCG CCCTCCGAGC CCGAGCCCGA TACCGCGCCC
GCGCTCCACC GCCCCGGCGT GACCCTGCTC GCCACCTGCC TCGCCCTGTT CCTCGGCCAG
GTCGACACCA CGGCCGTGAA CCTCGCCCTG CCCGCGATCC GGCACGACCT GTCCGGCGGC
ATCTCCGGCC TGCAATGGGT CGTCGACGCC TACAACGTCA CCTTCGCCGC GCTCCTGCTC
ACCGGCGGCA CGCTCGGCGA CCGCTTCGGA CGCCGCCGGC TGTTCCGCAC CGGCGTGGCC
GTCTTCGTCC TCGGATCCAC CGTCTGCGCG CTCGCGCCGG GACTTCCGGT GCTGCTGGCG
GGCCGCGTCA CGCAGGGCGT CGGCTCCGGG ATGATGCTGC CGCAGAGCCT TGCGATCCTG
GCCACGGCCT TCCCCGGGCG CCGGGAGCGG AACAAGGCGA TGGCCGCGTG GTCGATCGTG
GCCGGCAGCG GACTGGCCGT CGGGCCCACG TTGGGCGGGC TGGCCGTGCA GACGCTCGGC
TGGCAGTCGA TCTTCTGGGT CAACGTGCCG ATCGGCATCG CGGCACTCGT GCTCACGCTG
CGGCACGTAC CGGAGTCACG CAACCCGCGG GCGCGCACGC TGGACCCGCT CGGCCAGGTC
TTGGCGATCG CCTCCCTCGG CCTGCTGACC TTCGTCGCAG TCCAGGGACG CGAGCTGGGC
TGGACCTCCC CAGCGACGCT GGCGTGCATC GCAGGGTGCG TGGTCGGTCC CGCGGCGTTC
GTCGCGGTCG AACGCCGTCG CAGCGACCCG ATGCTCCCGC TGGACCTGCT GCGGCGCGGG
CAGCTGCCGG TCGCGGTCAT CGTCGCGGCG TGCATGACCT TCGGGATGTA CGGCCTGTTC
CTCCTGACCA GCCTGATGTT CCAACAGGAA CGCGGCGCCT CCGCACTCGG CGCCGGCGTG
GCGATGCTGC CGCTGGCGGT CGCCGCGACG GTCCTCTCGC CACTGACCGG ACGCCTGGTG
ACGCGCTACG GACCGCGGCT GCCGATGACC GCCGGCATGA CCGCGATGGG AACCGGCGTC
CTGATCTTCG CCGTCGCCGG AGCGGACGCG AACCTCCTGG TCCTGGAGAT CGCCTTCACC
GTCATCGGCA TCGGACTGGC TCTGAACACC GGCCCGGTCG TCGGCGTCGC CGTCTCGGCA
GTAGCGTCCG AACTAGCCGG CCTCGCCTCA GGCATCGCCA ACCTGGCCCG CATGTTCGGC
GCCACCCTCG GCGTCGCGGT TCAGGGCTCG GTCATGGCCG TGGCCTCCGC CGGAGCGGCA
AGCGGCCCGC ACTTCGTGCA CGGACTGCGG ATCGCGGTCG CGGTGGGGTG CGCCGTGGAG
TTCCTCGGAG CTGCGGTCGC GTTCCGGTAC GTCGACCGGC TCAGCCCGCC GTCGTCCGGT
TGA
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| Protein sequence | MTTTSSGSAS PSEPEPDTAP ALHRPGVTLL ATCLALFLGQ VDTTAVNLAL PAIRHDLSGG
ISGLQWVVDA YNVTFAALLL TGGTLGDRFG RRRLFRTGVA VFVLGSTVCA LAPGLPVLLA
GRVTQGVGSG MMLPQSLAIL ATAFPGRRER NKAMAAWSIV AGSGLAVGPT LGGLAVQTLG
WQSIFWVNVP IGIAALVLTL RHVPESRNPR ARTLDPLGQV LAIASLGLLT FVAVQGRELG
WTSPATLACI AGCVVGPAAF VAVERRRSDP MLPLDLLRRG QLPVAVIVAA CMTFGMYGLF
LLTSLMFQQE RGASALGAGV AMLPLAVAAT VLSPLTGRLV TRYGPRLPMT AGMTAMGTGV
LIFAVAGADA NLLVLEIAFT VIGIGLALNT GPVVGVAVSA VASELAGLAS GIANLARMFG
ATLGVAVQGS VMAVASAGAA SGPHFVHGLR IAVAVGCAVE FLGAAVAFRY VDRLSPPSSG
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