Gene Caci_2056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2056 
Symbol 
ID8333400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2327499 
End bp2329157 
Gene Length1659 bp 
Protein Length552 aa 
Translation table11 
GC content70% 
IMG OID644955206 
Productprotein of unknown function DUF853 NPT hydrolase putative 
Protein accessionYP_003112817 
Protein GI256391253 
COG category[R] General function prediction only 
COG ID[COG0433] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACT CTGCGAACGA AGCGAACCCA GCGAACCCAG CGAACCCAGC GAACCCAGCG 
AACCCAGCCG GCTCGGCGAA AGCAGCCGGC TACCCCCAGA CCGTCGCCGC GGGCTACGCC
TTCGACGGCC CGACCCTGGA CCTCGGTGCG CTGATGGCCG ACGGCACCCC GGATCCGGAC
GTCCAGGTCC GCATCCCGCT GACCATGCTC ACCCGGCACG GCCTGGTCGC CGGCGCCACC
GGTACCGGCA AGACCAAGAC CTTGCAGGCC ATGGCCGAGC AGCTCTCGGC AGCCGGCGTC
CCGGTGTTCC TGGCCGACAT GAAGGGCGAC CTGTCCGGGC TGGCGGCGCC CGGCGCGGGC
GGCGAGAAGC TGACCACCCG CACCCAGGCG CTGGGCCAGC AGTGGTCTGC GAAAGCCTTC
CCCTGCGAGT TCTACACGCT CGGCGGCGAG GGGACCGGCG TCCCGGTGCG CGCGACGGTC
TCGGCGTTCG GGCCGACGAT GCTGGCCAAG GTGCTCGGGC TGAACCCGAC CCAGGAGTCC
TCCCTGGGCC TGGTCTTCCA CTACGCCGAC ACCAAGGGCT GGCTGCTGCT GGACCTCAAG
GACCTGCGCA GCGTGCTGGT CCATCTGACC AGCGACGAGG GCAAGGCGGA GCTGAAGGCG
ATCGGCGGAC TGTCGCCGCA GACCGCCGGG GTCATCCTGC GGGAGCTGAC GGCGTTCCAG
GCCAAGGGCG CCGAGCCGTT CTTCGGGGAG ACCGAGTTCA ACCCGCTCGA CCTGATCCGC
ACCACGCCCG ACGGCCGCGG CGTGGTGTCG CTGCTGGAGC TGCCGGGAGT CGCCAACCAG
CCCGAGCTGT TCTCCACGTT CCTGATGTGG CTGGTCGCGG ACCTCTTCGA GCGGTTGCCG
GAGGTCGGCG ACGTGGACCG GCCCAAGCTC GTGTTCTTCT TCGACGAGGC GCACCTGCTG
TTCACCGGGG CGTCCAAGGC CTTCCTGTCG GCGATCACGC AGGCGGTGCG GCTGATCCGG
TCCAAGGGCG TCGGGATCTT CTTCGTCACG CAGACCCCGA AGGACGTGCC CGGCGACGTT
CTGGCGCAGC TCGGCAACCG GGTTCAGCAC GCGCTGCGCG CCTACACCCC CGACGACGCC
AAGGCGCTGA AGGCGACGGT GTCGACGTTC CCGAAGTCGC CGTACGACCT GGGCGAGGTG
CTGCAGAATC TCGGGATCGG CGAGGCGGTG GTGACCGTGT TGTCCGAGAA CGGCGCGCCG
ACTCCGGTGG CGTGGACCCG GCTGCGCGCC CCGGAATCGC TGATGGCTGA GGCGGATCAG
GCGGTCGTGC AGGGGATTGT GAACGCCTCG CCGCAGCTGG CGACCTATGG TCCGGCCGTC
GATCGGGAGT CGGCGTACGA GATCCTCGCC GCGCGCGAGC AGGAAGCGCA GGCAGCGGCT
GAGGATCAGC GCCGGGAGGA CGAAGCGGCC AAGGCCGAGC GCGAGACCCA GACCCAGTCT
CAGAGCCAGA GTCAGAGCCG GAGCCGCCCG AGCACCGCCG CCAAGGCTCC GCCGAACCTC
ATCGACCAGG CGCTCGGATC AGCGACGGTC AAGAAGGCGG TGAACACCGC GGTGCGAGAG
TTGACGCGCA GTATTTTCGG GACGCGCAAA CGCGGGTAA
 
Protein sequence
MTNSANEANP ANPANPANPA NPAGSAKAAG YPQTVAAGYA FDGPTLDLGA LMADGTPDPD 
VQVRIPLTML TRHGLVAGAT GTGKTKTLQA MAEQLSAAGV PVFLADMKGD LSGLAAPGAG
GEKLTTRTQA LGQQWSAKAF PCEFYTLGGE GTGVPVRATV SAFGPTMLAK VLGLNPTQES
SLGLVFHYAD TKGWLLLDLK DLRSVLVHLT SDEGKAELKA IGGLSPQTAG VILRELTAFQ
AKGAEPFFGE TEFNPLDLIR TTPDGRGVVS LLELPGVANQ PELFSTFLMW LVADLFERLP
EVGDVDRPKL VFFFDEAHLL FTGASKAFLS AITQAVRLIR SKGVGIFFVT QTPKDVPGDV
LAQLGNRVQH ALRAYTPDDA KALKATVSTF PKSPYDLGEV LQNLGIGEAV VTVLSENGAP
TPVAWTRLRA PESLMAEADQ AVVQGIVNAS PQLATYGPAV DRESAYEILA AREQEAQAAA
EDQRREDEAA KAERETQTQS QSQSQSRSRP STAAKAPPNL IDQALGSATV KKAVNTAVRE
LTRSIFGTRK RG