Gene Caci_2050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2050 
Symbol 
ID8333394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2320782 
End bp2321603 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content71% 
IMG OID644955200 
Producthypothetical protein 
Protein accessionYP_003112811 
Protein GI256391247 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGCCG CGACATCCGC ATCCGCCGCC CCGCCTCATC CAGCGCCGCC GGCGTGGTGG 
GTGGCGGTCC GCGAGATCTG GACGCACGGC CGGCGCATCG AACGAGTCTG CTACGTCCTC
GGCCTGGTGC TCATCACCTC CGGCGCCTTC CACTTCACCG TGTTCTTCAT CCGCGGCGGA
CCGTGGGAAG GACCCGTCTC CTGGCGCAAG CCGACGACCT TCGGCCTGTC CTTCGGCCTC
ACGCTCATCG CCGTCGCCTG GGTCGCCTCC TCCCTCAAGC TCTCGGAGCG CACCCGGGCT
CTGGCGCTCG GCATCTTCGC CGCCGACTGC TTCGTCGAGG TCGGCGGCAT CACCCTCCAG
GCGTGGCGCC ACGTCCCGTC CCACATCGAC ATGCAGGGGT CCTTCAACAC CGGCGTGTCG
ATGACCCTGG CCGTCGGCGG CGGCATCCTG GTCCTCGTGC TGGGCCGGCT CGCCTTCGCG
GCGTTCCGCG GCGATCCGGA CCAGGCGCCG TCGATGCGCC TGGCCCTGCG CGCCGGCTTC
CTCACCCTGA TGATCGGCCT GCTCTCCGGC GCCGCGATGA TCGCCCGCGG TACGTCCGAG
GCCAACACCG GACACCAGCA ACAGGCCTAC CAGGACCTCG GTTTCCTCAA GCTGGTCCAC
GGGATCAGCC TGCACGGCGT GCTGGTCCTG CCCACGCTCG CCTGGGCCCT GACCCTGACG
TCCTGGCCGG AGCCGAAGCG GACGCGGACG GTCGCGCTGG CCGCCTCCGC CTACGGGATC
GCCATCGCCG CGGCGCTGGT CTTCGACCTC GCGACGATGT GA
 
Protein sequence
MTAATSASAA PPHPAPPAWW VAVREIWTHG RRIERVCYVL GLVLITSGAF HFTVFFIRGG 
PWEGPVSWRK PTTFGLSFGL TLIAVAWVAS SLKLSERTRA LALGIFAADC FVEVGGITLQ
AWRHVPSHID MQGSFNTGVS MTLAVGGGIL VLVLGRLAFA AFRGDPDQAP SMRLALRAGF
LTLMIGLLSG AAMIARGTSE ANTGHQQQAY QDLGFLKLVH GISLHGVLVL PTLAWALTLT
SWPEPKRTRT VALAASAYGI AIAAALVFDL ATM