Gene Caci_2048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2048 
Symbol 
ID8333392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2318411 
End bp2319034 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content70% 
IMG OID644955198 
Productlipolytic protein G-D-S-L family 
Protein accessionYP_003112809 
Protein GI256391245 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2755] Lysophospholipase L1 and related esterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.137191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCTTCA AGGACGGCCA GCACATCCTT CTCATCGGCG ACAGCATCAC CGACTGTGGA 
CGCCGCGATG AGGACGCCCC GTACGGCCGC GGGTACGTCA GCCTGCTGCG GGCGTTCACT
ACCGCCCGGC ACCCCGAGGC CCGGCTGACC TGGACCAACC ACGGCACCAG CGGCAACACG
ACCCGCCACC TGGCCGAACG TTGGGAGAGC GACGCGCTCG CGCCGCGTCC GGACTGGCTG
TCGGTGATGA TCGGGATCAA CGACGTCTGG CGCGCCTTCG ACGGGAACCC GGACCTCGCC
GTTCCGCTGG AGGAGTACGT CGACACCCTG CGCACGCTGC TGCGCCGCGC GGTCGAGGAG
ACCGGCTGCC GCCTGATCCT GGCCGATCCG TACATCATCG AGCCGGACCG CACCGAGCCG
CAGCGCGCCG CCAGCGACAC GTTCGCGACC GCGGTGGCGG GGCTGGCCGA GGAGTTCGAC
GCGGTGCACA TCCCGACACA GCGGGTGTTC GACGCGGCGC TGGCGAACAC GGGGTCGCAG
TACTGGGCGA ACGACCGGAT CCACCCGAAC CTGGCGGGTC ACGCGCTGAT CGCCGACGCG
TTCATGAAGG TGTTGGAGAT CTGA
 
Protein sequence
MFFKDGQHIL LIGDSITDCG RRDEDAPYGR GYVSLLRAFT TARHPEARLT WTNHGTSGNT 
TRHLAERWES DALAPRPDWL SVMIGINDVW RAFDGNPDLA VPLEEYVDTL RTLLRRAVEE
TGCRLILADP YIIEPDRTEP QRAASDTFAT AVAGLAEEFD AVHIPTQRVF DAALANTGSQ
YWANDRIHPN LAGHALIADA FMKVLEI