| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2042 |
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| Symbol | |
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| ID | 8333386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 2311695 |
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| End bp | 2314220 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644955192 |
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| Product | ribonucleoside-diphosphate reductase, alpha subunit |
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| Protein accession | YP_003112803 |
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| Protein GI | 256391239 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.930339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00801348 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACGGTCA CCCAGGTCGG CAGCGCGAGG CTCGAGCTGC CGGAGCCGGC GTCGGAGCCG
GACACGGCGC CGGGAGCAGG CGCGGCAGGA GCAGGGGCGG CAGGAGCAGG GGCAGCAACG
CAGGCAGCGG GGCGCGCGGG GGCGCAGACG CTGCCGGCCG AGCAGGCTAC ACAGGCCGAG
CAGGCCGCAC AGGCCGAGCA GGCCGCACAG CCCGAGCAGT CCGTAGCGTC CAAGCACCCC
GAGCAGTCCG CGGAGCAGGC ACTGGCGCGC GAAATCGCCG CCTGCTCCGC GGACCTGCCC
GACATCGACG TGAACCGGGT CGTCCGCAAG ACCTTCGCCG GTCTGCCGCC GGGCGCCGGT
GCGGACCAGG TCGCCGACCT CGCCGTCCAG AGCGCCGCCG AGCTGATCGG CGAGGAGCCG
CAGTACTCGA AGCTCGCCGC CCGCCTGCTC TCCGGGGTCA TCGCGCGCGA GGCGGCGGGT
CAGGGCGCGA CCTCCTTCAG CGCGTCCGTC GCCGTCGGGC ATCGGGAGGG CCTGATCGGC
GACGTGACCG AGGCGCTGAT CACCGGCGCC GCCGCGCGGT TCGACGCGGC GATCGACCCC
GCCGGCGACC TGCGCTTCGA GTACTTCGGC CTGCGCACCG TCTACGACCG CTACCTGCTG
CGCCACCCGG TGACCCGCCG CGTGATCGAG ACGCCCCAGC ACTTCCTGTT GCGCGTGGCC
GCCGGGCTGT CGCAGGACCC GCAGGAGGCC GTCGGCTTCT ACCGCCTGAT GTCCTCCCTG
GCCTACCTGC CCAGCTCCCC CACGCTGTTC AACTCCGGCA CCCGCCACAC CCAGATGTCG
TCCTGCTACC TGGTGGACTC CCCGCTCGAC GAGCTGGACT CCATCTACGA CCGCTACCAC
CAGGTCGCGC GCCTGTCGAA GTTCGCCGGC GGCATCGGCA TCGGCTTCTC CCGCGTCCGC
TCGCGCGGCG CCCTGATCCG CAGCACCAAC GGCCGCTCCA ACGGCATCGT CCCGTTCCTG
CGCACACTGG ACTCCTCGGT CGCGGCGGTC AACCAGGGCG GGCGGCGCAA GGGCGCGGCG
TGCGTGTACC TGGAGCCGTG GCACCCGGAC ATCGAGGAGT TCCTCCAGCT GCGGGACAAC
ACCGGCGAGG ACGCGCGCCG CACGCACAAC CTGAACCTGG CCAACTGGAT CCCCGACGAG
TTCATGCGGC GCGTCGAGGC CGACGGCGTG TGGTCGCTGA TGGACCCCGA CCAGGTCCCG
GAGCTGCCGG ACCTGTGGGG CGCGGAGTTC GACGCGGCGT ACCGCAAGGC CGAGGCCGAG
GGCCGCTACT CGCGCCAAGT CTCGGCGCGC GAGCTGTACG GCAAGATGAT GCGCACGCTG
GCGCAGACCG GCAACGGCTG GATGACGTTC AAGGACGCCT CCAACCAACT CTGCAACCAG
ACCGGCGTTC CCGGTAACAC AGTGCACCTG TCGAATCTGT GCACTGAGAT CATCGAGGTC
TCCTCCGACA CCGAGACCGC GGTGTGCAAC CTCGGCTCGA TCAACCTGGC CGCGCACCTG
ACGCCGGCCC GCGACGCGGT CGACTGGGAC CGCCTGCGCG CCACGGTCCG CACCGCCGTG
GTCTTCCTGG ACCGCGTCAT CGACATCAAC TACTACCCGA GCGAGCAGAC CGCGGCGTCG
AACCCGCGCT GGCGTCCGGT CGGGCTGGGC CTGATGGGGC TCCAGGACGT GTTCTTCGCG
CTGCGGCTGC CCTTCGACGA CGAGCGCGCG CGGGAGCTGT CGACGCGCAT CTCCGAGGAG
ATCTACCTGA CGGCGCTGGA GACCTCCGCC GGTCTGGCCG AGGAGTTCGG CGCGCACCCG
GCGTTCGCCG ACACCCGCGC GGCGAAGGGC GACCTGCAAC CGGACCTGTG GAACGTCGCG
ACCTCGCCGG AGCTGGCCAC GCGCTGGAAC GCGGTGCGCG GACGCGTCGC CGCCACGGGA
CTGCGCAACT CACTGCTCGT GGCGATCGCC CCGACCGCGA CCATCGCCTC CATCGCCGGC
TGCTACGAGT GCATCGAGCC GCAGGTGTCG AACCTGTTCA AGCGCGAGAC GCTGTCCGGG
GAGTTCCTGC AGATCAACAG CGCTCTGGTC GGCGAGCTGA AGGCGCTGGG CCTGTGGACC
CCGGCGGTGC GCGAGGCGAT CAAGCGCGCC GAGGGCTCGG TACAGGGCGT CGAGGCGCTC
CCGGCGGAGG TCAGGGCCCT GTATCGCACG GCCTGGGAGC TGCCGCAGCG CGCGCTGATC
GACCTGGCCG CCGCGCGCGG ACCGTTCATC GACCAGTCGC AGTCACTGAA CCTGTTCCTG
GCCGCGCCGA CGATCGGGAA GCTGTCGTCG ATGTACATGT ACGCGTGGAA GGCCGGGCTG
AAGTCGACGT ACTACCTGCG CTCGCGCCCG GCGACGCGGA TCCAGCAGGC GACGGTGGCG
GTCGCGGCGG AGGAGGCGGT GGCCTGCTCT CTGGAGAACC CCGAGTCCTG CGAAGCCTGC
CAGTAA
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| Protein sequence | MTVTQVGSAR LELPEPASEP DTAPGAGAAG AGAAGAGAAT QAAGRAGAQT LPAEQATQAE
QAAQAEQAAQ PEQSVASKHP EQSAEQALAR EIAACSADLP DIDVNRVVRK TFAGLPPGAG
ADQVADLAVQ SAAELIGEEP QYSKLAARLL SGVIAREAAG QGATSFSASV AVGHREGLIG
DVTEALITGA AARFDAAIDP AGDLRFEYFG LRTVYDRYLL RHPVTRRVIE TPQHFLLRVA
AGLSQDPQEA VGFYRLMSSL AYLPSSPTLF NSGTRHTQMS SCYLVDSPLD ELDSIYDRYH
QVARLSKFAG GIGIGFSRVR SRGALIRSTN GRSNGIVPFL RTLDSSVAAV NQGGRRKGAA
CVYLEPWHPD IEEFLQLRDN TGEDARRTHN LNLANWIPDE FMRRVEADGV WSLMDPDQVP
ELPDLWGAEF DAAYRKAEAE GRYSRQVSAR ELYGKMMRTL AQTGNGWMTF KDASNQLCNQ
TGVPGNTVHL SNLCTEIIEV SSDTETAVCN LGSINLAAHL TPARDAVDWD RLRATVRTAV
VFLDRVIDIN YYPSEQTAAS NPRWRPVGLG LMGLQDVFFA LRLPFDDERA RELSTRISEE
IYLTALETSA GLAEEFGAHP AFADTRAAKG DLQPDLWNVA TSPELATRWN AVRGRVAATG
LRNSLLVAIA PTATIASIAG CYECIEPQVS NLFKRETLSG EFLQINSALV GELKALGLWT
PAVREAIKRA EGSVQGVEAL PAEVRALYRT AWELPQRALI DLAAARGPFI DQSQSLNLFL
AAPTIGKLSS MYMYAWKAGL KSTYYLRSRP ATRIQQATVA VAAEEAVACS LENPESCEAC
Q
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