Gene Caci_2040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2040 
Symbol 
ID8333384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2309912 
End bp2310637 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content70% 
IMG OID644955190 
Producthypothetical protein 
Protein accessionYP_003112801 
Protein GI256391237 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.05668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0365755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTGA TCTCCTTGGT GCCATCGCTC ACCGAGGCGA TCGCGGCGAC CGCACCGGAC 
CTGCTCGTCG GCGTGACGGC GTGGTGCTCG CACCCGGCGG ACCTGGACGT CGAACGGATC
GGCGGGACGA AGAACCCTGA CGTCCATCGG ATCGTCGCGC TGGCGCCGGA TCTGGTCGTG
GCCAACGAGG AGGAGAACCG CCGGGACGAC CTCGACGCGC TCCGCGAGGC CGGGATCTCG
GTGCTGGTCA CCACCATCCG CACGCTCGAC GAGGCCTTCA GCGAGCTGGA CCGGATGCTA
ACGGCCGGCT GCGGGCTCGA CCGGCCCGCG TGGTTGGACC AGGCGGAGGC CGCCTGGTCC
TTCCCGGCTC CGGCTATCGA GGAGGCGGTC CCGGCGATCA TCCCCATTTG GCGGCGGCCA
TGGATGGTGC TCGGGCGCGA CACGTTCGCC GGCGACGTAC TGGCGCGGCT CGGCGTGCGC
AATATCTACG CCGACCACGC CGAGCGCTAT CCGAAGATCC CGCTTCCCGA ACTCCTTGCC
GCTAGCGCCG AGCTAGTCGT TCTCCCCGAC GAGCCCTATG CCTTCGACGC ATCCGACGGC
CCGGACGCGT TCCCCGATCT GCCTTCCGCG CTGCTCTCCG GCCGTCACCT CACCTGGTAC
GGGCCCTCAC TCGTCGAGGC GCCGGACGTG CTGCGCCGTC AGCTGGACGC CGCTGCTCAC
AGCTGA
 
Protein sequence
MRVISLVPSL TEAIAATAPD LLVGVTAWCS HPADLDVERI GGTKNPDVHR IVALAPDLVV 
ANEEENRRDD LDALREAGIS VLVTTIRTLD EAFSELDRML TAGCGLDRPA WLDQAEAAWS
FPAPAIEEAV PAIIPIWRRP WMVLGRDTFA GDVLARLGVR NIYADHAERY PKIPLPELLA
ASAELVVLPD EPYAFDASDG PDAFPDLPSA LLSGRHLTWY GPSLVEAPDV LRRQLDAAAH
S