| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_2028 |
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| Symbol | |
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| ID | 8333372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 2296296 |
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| End bp | 2298389 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644955178 |
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| Product | Beta-galactosidase |
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| Protein accession | YP_003112789 |
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| Protein GI | 256391225 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1874] Beta-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.119513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACGC GCGTAGAAGG ACTTTTGTAT GGAGCGGACT ACAACCCGGA GCAGTGGCCG
GAGTCCGTCT GGAAGCAGGA CGTCAACCTG ATGCGGGACG CGGGCGTCAC GATGGTGACG
CTCGGGGTGT TCTCCTGGGC CCGGTTGCAG CCCGCCGAGG ACCAGTGGGA CTTCGAGTGG
CTGGACCGGC TGATGGACCT GTTCCACAGC CGGGGGATCG CCGTGGACCT GGCGACGGCG
ACGGCCTCGC CGCCGGCGTG GTTCGTGCGC CAGTACCCGC AGACCCTGCC GGTCACGGCG
GACGGCGTGC GCCTGGAGTT CGGCTCCCGG CAGCACTACT GTCCCTCCTC GCCGGTCTAC
CGCGAGGCGG CGACCCGGCT GGCCCGCACG ATCGCCGAAC GGTACGCCGA GCACCCGGCG
CTGGCGCTGT GGCACATCCA CAACGAGTAC GGCGACCACG TCGCCGAGTG CTTCTGCGAC
GTCTCGGCCG AGGACTTCCG CAGCTGGCTG CGCGAGCGCC ACGGCGACGA CATCGCGCAG
CTGAACTTCG CCTGGGGCAC CGAGTTCTGG TCCCAGCGCT ACTCGGACTT CGCCCAGATC
GAACCGCCGC GCACCGCGCC GGGCCCGATC AATCCGGGGC AGCTGCTGGA CTGGCGCCGC
TTCAGCTCCG ACGCCCTGCT CGCCTGCTTC CTGGCCGAGC GCTCCGTTCT GAAGGAGGTG
ACACCGGAGA TCCCGGTCAC GACCAACTTC ATGTCGATGA TGAAGGACCT CGACTACTGG
AAGTGGGCCG CCAATGAGGA CGTGGTCTCC GACGACGCGT ACCCGGACCC GGCCGACGGC
TCGGCCCATG TGCTCGCCGC GATGAACTAC GACCTCATGC GCTCCCTGGG CAACGGCCGG
CCGTGGCTGC TGATGGAGCA GGCGCCGTCG GCGGTGAGCT GGCGCGCGGT GAACGTGCCC
AAGACCCCGG ACCAGCGGCG CCTGTGGTCG CTGCAGACCG TGGCACGCGG CGCGGACGGC
GTCATGCACT TCCAGTGGCG CGCCTCGCGG GCCGGGGCGG AGAAGTTTCA CAGCGCCCTG
CTTCCCCACG GCGGAACCCA GTCGCGGGGG TGGCGCGAGA CGGTCCGGAT CGGCGAGGAG
CTGGCGCAGC TCAAGGAAGT CGCGGGGAGC CGGATCGAGA GCGCGGTCGC CATCGTCCTG
GACTGGAACT CCTGGTGGGC GCTGGAGGCC GAGGACCATC CCTCGGCGCG CGTGCGGCTC
AGGGAGCAGA TCCTGAGCTG GTACTCGGTG CTGCACCGCT GGAACCACGT CGTCGACTAC
GTGCCGCCCG ACGCGGATCT GAGCCCGTAC AAAGTGGTGC TCGCGCCGAA CCTGTACTCG
GTGAGCACCG AGAACGCCGC CCGGCTGACC GACTACGTGT ACGGCGGAGG GTACCTCGTC
GTCGGTTTCT TCAGCGGGAT CGTCGACGAG CTGGACCACA TTCATCAGGG CACTGATGGC
ACCGGCGGCG GGTATCCCGG ACCGCTGCGG GAGGTGCTCG GGGTCGCGGT CGACGAGTGG
TGGCCGATCG CGGACGGACG CTCGGTGCCG GTCACCTTCA GCGCCGACGA GGAGGCCGCG
AAGGCGAAGA AGAAGCACGT CAGCGCCAGC TCCGGCATCG GCTACCACCC GGCGCCGGCG
GCCGTGCGCT GGAGCGAGTG GCTCGGCACG ACCACCGCCA GATCAGTCGC GCACTACACC
GACGGACCGT TGAAGGGGCG TCCGGCGGTC ACCTGCAACG AGTTCGGCGA GGGCCGCGCC
TGGTACGTCA GCTGCGATCT GGGCGGGGAC ATCGAGAAGG TCCTCGGGGA GGCCGTCCGT
CCCGCCGTGG TGTGGCCGTC GCTGGCCTCG ACGCTGGCGT TCACCGGGGT CGAGGTGGTC
TGCCGCAGTT CGGAGACGCA CCACTACTAC TTCCTGCTCA ATCACAGCGA CAAGCCGGTC
GACCTGGGCT CGTCCCTGCC GTACGGCGCG GTGAACCTGC TGACCGGCAA TCGTCCCACC
CATCTGGCCG CGCAAGGCGT CGTGGTCCTG AAGGTAGGAA GGATAGGAAG GTGA
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| Protein sequence | MITRVEGLLY GADYNPEQWP ESVWKQDVNL MRDAGVTMVT LGVFSWARLQ PAEDQWDFEW
LDRLMDLFHS RGIAVDLATA TASPPAWFVR QYPQTLPVTA DGVRLEFGSR QHYCPSSPVY
REAATRLART IAERYAEHPA LALWHIHNEY GDHVAECFCD VSAEDFRSWL RERHGDDIAQ
LNFAWGTEFW SQRYSDFAQI EPPRTAPGPI NPGQLLDWRR FSSDALLACF LAERSVLKEV
TPEIPVTTNF MSMMKDLDYW KWAANEDVVS DDAYPDPADG SAHVLAAMNY DLMRSLGNGR
PWLLMEQAPS AVSWRAVNVP KTPDQRRLWS LQTVARGADG VMHFQWRASR AGAEKFHSAL
LPHGGTQSRG WRETVRIGEE LAQLKEVAGS RIESAVAIVL DWNSWWALEA EDHPSARVRL
REQILSWYSV LHRWNHVVDY VPPDADLSPY KVVLAPNLYS VSTENAARLT DYVYGGGYLV
VGFFSGIVDE LDHIHQGTDG TGGGYPGPLR EVLGVAVDEW WPIADGRSVP VTFSADEEAA
KAKKKHVSAS SGIGYHPAPA AVRWSEWLGT TTARSVAHYT DGPLKGRPAV TCNEFGEGRA
WYVSCDLGGD IEKVLGEAVR PAVVWPSLAS TLAFTGVEVV CRSSETHHYY FLLNHSDKPV
DLGSSLPYGA VNLLTGNRPT HLAAQGVVVL KVGRIGR
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