Gene Caci_2026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2026 
Symbol 
ID8333370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2293466 
End bp2293885 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content70% 
IMG OID644955176 
Productthioredoxin 
Protein accessionYP_003112787 
Protein GI256391223 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.12861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGTCG TGGAACTGAC CAAGGACACC TTCGCCGAGA CCGTGGAGGG CGAGGGGATC 
ACGCTCGTCG ACTTCTGGGC CGAGTGGTGC GGGCCGTGTC GGTCCTTCGC CCCGGTGTAC
CAGAAGGCCG CCGGCAAGCA TGAGGACATC GTGTTCGGCA AGGTCGACAC CGAGGCCGAG
CAGGAGTTGG CCATGGCGTT CGACATCCGC TCGATTCCCA CGCTGATGAT CGTGCGCGAC
GGCGTCACCC TCTACCAGCA CCCGGGCGCG CTGCCGGAGT CGGCGCTGGA GGACCTGATC
GCGCAGGCTC GGGCGCTGGA CATGGACGAG GTGCGCAAGG CGCTGGCTGA GCGGGCCGCC
GAGGCTGAGG CTCAGAGCGC CGACAGCACC GCCGCCGACG CTGAGAGCGC CGCCGTCTGA
 
Protein sequence
MAVVELTKDT FAETVEGEGI TLVDFWAEWC GPCRSFAPVY QKAAGKHEDI VFGKVDTEAE 
QELAMAFDIR SIPTLMIVRD GVTLYQHPGA LPESALEDLI AQARALDMDE VRKALAERAA
EAEAQSADST AADAESAAV