Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_2006 |
Symbol | |
ID | 8333350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 2270405 |
End bp | 2270965 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644955156 |
Product | protein of unknown function ATP binding |
Protein accession | YP_003112767 |
Protein GI | 256391203 |
COG category | [R] General function prediction only |
COG ID | [COG2229] Predicted GTPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0832547 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.959688 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATCG TGCAGACAAC GGCCAAGATC CTGGTCGCCG GCGGGTTCGG CGTGGGCAAG ACCACGCTGG TCGGGTCGGT GTCCGAGATC GAGCCGCTGA CCACCGAGGC CGAGATGACC TCGGTGGGAC GCGGTATCGA CGACACGGTG GGCGTGCCGG GCAAGACGGC GACCACGGTC GCCTTCGACT TCGGCCGCCT GACGCTGGCC GACGACCTGA TCCTGTACCT GTTCGGCACC CCGGGCCAGG AGCGCTTCTG GTTCCTGTGG GAGGAGTTGG CCCGCGGCGC CGTCGGCGCG GTGGTCCTGG CCGACGTCCG CCGCCTGGCC GACGCCTTCG CCGCCATCGA CTTCTTCGAG CACCGCGGCA TGCCCCACGT CGTGGCGGTG AACCAGTTCG ACGGCGCCCG CAGCTACAGC CAGGAGGCCC TGCGCGAAGC CCTCGCGATC CCGTCCTCCA CCCCGGTGAT GATCTGCGAC GCCCGCGACC GCACCTCCAC CGTCACCGTC CTGCTCGCCC TGGTCGAACA CGCGGTGAAG TGGCACGCCG AGGAGGCGTG A
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Protein sequence | MTIVQTTAKI LVAGGFGVGK TTLVGSVSEI EPLTTEAEMT SVGRGIDDTV GVPGKTATTV AFDFGRLTLA DDLILYLFGT PGQERFWFLW EELARGAVGA VVLADVRRLA DAFAAIDFFE HRGMPHVVAV NQFDGARSYS QEALREALAI PSSTPVMICD ARDRTSTVTV LLALVEHAVK WHAEEA
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