Gene Caci_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2006 
Symbol 
ID8333350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2270405 
End bp2270965 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content70% 
IMG OID644955156 
Productprotein of unknown function ATP binding 
Protein accessionYP_003112767 
Protein GI256391203 
COG category[R] General function prediction only 
COG ID[COG2229] Predicted GTPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0832547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.959688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCG TGCAGACAAC GGCCAAGATC CTGGTCGCCG GCGGGTTCGG CGTGGGCAAG 
ACCACGCTGG TCGGGTCGGT GTCCGAGATC GAGCCGCTGA CCACCGAGGC CGAGATGACC
TCGGTGGGAC GCGGTATCGA CGACACGGTG GGCGTGCCGG GCAAGACGGC GACCACGGTC
GCCTTCGACT TCGGCCGCCT GACGCTGGCC GACGACCTGA TCCTGTACCT GTTCGGCACC
CCGGGCCAGG AGCGCTTCTG GTTCCTGTGG GAGGAGTTGG CCCGCGGCGC CGTCGGCGCG
GTGGTCCTGG CCGACGTCCG CCGCCTGGCC GACGCCTTCG CCGCCATCGA CTTCTTCGAG
CACCGCGGCA TGCCCCACGT CGTGGCGGTG AACCAGTTCG ACGGCGCCCG CAGCTACAGC
CAGGAGGCCC TGCGCGAAGC CCTCGCGATC CCGTCCTCCA CCCCGGTGAT GATCTGCGAC
GCCCGCGACC GCACCTCCAC CGTCACCGTC CTGCTCGCCC TGGTCGAACA CGCGGTGAAG
TGGCACGCCG AGGAGGCGTG A
 
Protein sequence
MTIVQTTAKI LVAGGFGVGK TTLVGSVSEI EPLTTEAEMT SVGRGIDDTV GVPGKTATTV 
AFDFGRLTLA DDLILYLFGT PGQERFWFLW EELARGAVGA VVLADVRRLA DAFAAIDFFE
HRGMPHVVAV NQFDGARSYS QEALREALAI PSSTPVMICD ARDRTSTVTV LLALVEHAVK
WHAEEA