Gene Caci_2005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_2005 
Symbol 
ID8333349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2269786 
End bp2270364 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content68% 
IMG OID644955155 
ProductDNA-3-methyladenine glycosylase I 
Protein accessionYP_003112766 
Protein GI256391202 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00624] DNA-3-methyladenine glycosylase I 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00955834 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.780317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGACG TGCAAGATCT TGTGACTGGC GAAGACGGCA TCCCCCGCTG CGGCTGGGCC 
GGCACCGGCG GCGACTACGC GGCCTACCAC GACACGGAGT GGGGCCGCAC CCTGCACGGC
GACGACGCCA TGTTCGAGCG CCTGAGCCTG GAGGGCTTCC AAGCCGGCCT GGCCTGGATC
ACGGTCCTGC GCAAACGAGA GGCCTTCCGC AAGGCCTTCA AGGACTTCCA GATCGACGCC
GTCGCCGCCC TCACCCCCGC CGACGTCGAA CTCCTCCTGA CCGACCCCGG CATCATCCGC
AGCCGCGCCA AGATCGAATC CGCGATCCAC AACGCCCGCA TCGTCCGCGA CTTCCCCGAA
GGCCTCGACG CCTACCTCTG GAACTTCGCC CCACCCACCC ACCGCCGCCC CACATCCTTC
GGCCAAACCC CCACCGAAAC CCCCGAATCC AAGGCCATGG CCAAAGCCCT GAAGAAGGCC
GGCGTGAAGT TCATCGGCCC CACCTCCGCC TACGCCCTGA TGCAGGCCAC CGGCATGGTC
GACGACCACC TGACCGGCTG CTTCCGCGCC AAGGCCTGA
 
Protein sequence
MGDVQDLVTG EDGIPRCGWA GTGGDYAAYH DTEWGRTLHG DDAMFERLSL EGFQAGLAWI 
TVLRKREAFR KAFKDFQIDA VAALTPADVE LLLTDPGIIR SRAKIESAIH NARIVRDFPE
GLDAYLWNFA PPTHRRPTSF GQTPTETPES KAMAKALKKA GVKFIGPTSA YALMQATGMV
DDHLTGCFRA KA