| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1995 |
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| Symbol | gabD2 |
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| ID | 8333338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 2258711 |
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| End bp | 2260264 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644955144 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_003112756 |
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| Protein GI | 256391192 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTGC CGCCTTCGGT CACCTCTGAA CTGCTCGCGA AGCTCACCGG CATGGTGGTC
TCCACCAGCG GTCGCGCCTA TCCGGTAACC GAGGTCTACA CCGGCGAGGA GGTCGTGGAC
CTGCCGCAGT CCGACCCGGC CGACGTCCAG ACCGCTTATG CCGCGGCCCG AGCGGCCCAG
GCGGTCTGGG CCTCCTGGCC GCTCAAGCGG CGGCTCGCGG TGATGAAGCG GTTCCACGCG
CTGCTGTTGG AGCAGGGGCT GATCGTCGCC GATCTGATGC AGGTCGAGAC CGGCAAGGCG
CGGCGGATGG CTTTCGAAGA GACCTGCGAC GTGCTCATGG TCACCAGCCA CTACATCAAG
GCGGCGCCGC GGATCCTCAA GGAGCGCAAG CACGGCGGCG TGGTGCCGCT GATGTCCACC
TCGACCGAGG TCCGGATTCC CAAAGGTGTC ATAGGGCTGA TATCGCCGTG GAACTTCCCC
TTCGCGACCA GCCTGTCCGA TGCGATGCCC GCGCTGATCG CCGGCAACGG CGTGGTGCTG
AAGCCGGACA ACAAATCCAC GCTCAACGTC GCCTATGGCG TCGGCTTGCT CTACGAAGCA
GGCATGCCCG CAGGCCTCGT GCAGATCGTC TGCGGTGAGG GCCCTGATAT CGGCGCGGCG
CTGATCGAGA ACGCCGACTA CGTCATGTTC ACCGGCTCGA CCGCGACCGG CCGGGTGATC
GGCGCCCAAG CCGGGCAGCA GCTGATCGGC TGCACCCTCG AACTCGGCGG CAAGAACCCG
TTGATCGTCC TGGACGACGC GAACCTCGAC GAGGTGATCG CCGGCACGGT GACCGCCACG
TTCCTGAACA CCGGCCAGGC GTGCATGCAC ATCGAGCGCA TCTACGTCTC CGAGCGCCGC
AAGGACGAGT TCACGCGGCG CTTCGTCGAA GCCGTCCAAG CGATCCGGGT CGCCGGAGCC
TACGACTTCT CCCCCGACAT GGGCTCGCTG GTCTCGGTCC CGCAGCGGGA ACGCGTGCAG
GCGCACGTCG AGGACGCCGT CGCGAAGGGC GCGACCGTGC TGACCGGCGG CAAGCCGCGC
CCCGATCTGG GCCCGGCGTT CTTCGAGCCG ACCGTCCTGA CCGGCGTCAC CCCGGACATG
GTGCTGGCCA GGACGGAGAC CTTCGGCCCG GTCACCGCGA TCTACCCGTA CACCTCGGTC
GACGCGGCGG TGGCGATGGC CAACGACACC GAATACGGCC TGAACGCCAG TGTCTGGGGC
GGCGACCGCC GCGCCGCCGA AGCCGTCGGC CGCCGCATCG AGGCCGGCAA CATCAACGTC
AACGACGGGC TGGCCGCCTC CTACGCCTCG AAGAAGAGCA CCTCCGGCGG CTTCAAGGCC
TCCGGCGTCG GCAGCCGCCA CGGCGACGCC GGCATGCTGA AGTACACCGA CGTGCAGAAC
GTCGCCGTGC TCAAGAAGCA GGTGCTCACG AACCCGCCGG ACACCGACTG GACCAAGCAG
GTCGACAAGA CGATCAAGGG TCTGCGATTC CTCCGCAAGC TGGGCATCCG CTGA
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| Protein sequence | MSLPPSVTSE LLAKLTGMVV STSGRAYPVT EVYTGEEVVD LPQSDPADVQ TAYAAARAAQ
AVWASWPLKR RLAVMKRFHA LLLEQGLIVA DLMQVETGKA RRMAFEETCD VLMVTSHYIK
AAPRILKERK HGGVVPLMST STEVRIPKGV IGLISPWNFP FATSLSDAMP ALIAGNGVVL
KPDNKSTLNV AYGVGLLYEA GMPAGLVQIV CGEGPDIGAA LIENADYVMF TGSTATGRVI
GAQAGQQLIG CTLELGGKNP LIVLDDANLD EVIAGTVTAT FLNTGQACMH IERIYVSERR
KDEFTRRFVE AVQAIRVAGA YDFSPDMGSL VSVPQRERVQ AHVEDAVAKG ATVLTGGKPR
PDLGPAFFEP TVLTGVTPDM VLARTETFGP VTAIYPYTSV DAAVAMANDT EYGLNASVWG
GDRRAAEAVG RRIEAGNINV NDGLAASYAS KKSTSGGFKA SGVGSRHGDA GMLKYTDVQN
VAVLKKQVLT NPPDTDWTKQ VDKTIKGLRF LRKLGIR
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