Gene Caci_1989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1989 
Symbol 
ID8333332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2248961 
End bp2249746 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content71% 
IMG OID644955138 
Productprotein of unknown function DUF1503 
Protein accessionYP_003112750 
Protein GI256391186 
COG category 
COG ID 
TIGRFAM ID[TIGR03083] uncharacterized Actinobacterial protein TIGR03083 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.768755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAAAAA CTCTCGAGTT CCACGACGTG CTGCGACTGA TCGACGAACG ATCGGCCGCG 
TTCCGCGCCG CGGTCGCCGC CGCGCCCAGC CTCGACGCGC AGGTGCCGAC CTGCCCCGAG
TGGACGCTGT TCGACCTGGT CAAGCACCTC GGCGACAACC GCTACATCTG GGCCGCCACC
CTCGCCGCGG GACCTGACGC CACGGCCAAG GCCACCGCGG ACAGCGCCGG CGTCCCGGAA
GCGCCTCGGG AGCTCGAAGC CCTGCTGGCC TGGTCGGCCG AATCGACGCG GCAGCTGCTG
GAACAGCTGC GGGAGGCCGG CCCGGACCGC GGCAGCTGGG CGTGGTGGGA CATCAGTCCG
GAGTCGCCGC ACACCTGCGG CGCTGTCGCC CGGCACCAGC TGCAGGAGAT CGCGGTTCAC
ACCTACGACG CCCAGCTCAC CGCCGGCGAC CCGCAGCCGC TGCCGGAGGA GGTGGCGCTC
GACGGCGTCG ACGACTTCCT GTTCACGTGC GTCACCACGA CCAGCCCGTG GCCGCACGAC
CCCATCATCG CCGAGCACCA GGTCGCCGAA GGCCGCTCCT GGCGCCTCCG GCTCGACGCC
GACGGCGCGC ACACCACCCG CGTCGCCGAA TCCGACGCCA CTTTGGAGAA GGCCGGCGCC
ATCGCCCGCT CCACCGCCGC CGAGGCTGTC CTGGTCTTCT ACGGCCGACT TCCTGTGGAC
ACCTTCCAGA TGGAAGGCGA CCACCGGGTC TTCGACCAGC TCAAGGACTG GGACCCGGAC
GCGTAG
 
Protein sequence
MQKTLEFHDV LRLIDERSAA FRAAVAAAPS LDAQVPTCPE WTLFDLVKHL GDNRYIWAAT 
LAAGPDATAK ATADSAGVPE APRELEALLA WSAESTRQLL EQLREAGPDR GSWAWWDISP
ESPHTCGAVA RHQLQEIAVH TYDAQLTAGD PQPLPEEVAL DGVDDFLFTC VTTTSPWPHD
PIIAEHQVAE GRSWRLRLDA DGAHTTRVAE SDATLEKAGA IARSTAAEAV LVFYGRLPVD
TFQMEGDHRV FDQLKDWDPD A