| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1985 |
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| Symbol | |
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| ID | 8333328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2243030 |
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| End bp | 2245423 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644955134 |
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| Product | NB-ARC domain protein |
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| Protein accession | YP_003112746 |
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| Protein GI | 256391182 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00414294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.784778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGACA GTCAACCGAT GAAGCCGGGG GCGAACACCG TGTCGTCCTG GCTGTCCGGG
AATGCGCGGG AGGTGGTCCA GGCCCGCGAC ATCAGCGGCG GGATCCATAT TCATTCCGCG
GATCCGAGTC CGTTGCCGCG ACCGCGGCAG TTGCCTGCGG AGGTGTCGGC GTTCGTCGGG
CGAAGGCGGG AGTTCGAGCT TCTCCAGAGT TGGGTTCGAG GCGGCGGTGG TGCGGGCTCG
GCTGCCGGCG GGTCGGTGCT GATCGTCGGC ACTGCCGGTG TCGGGAAGAC GTCGCTGGCC
GTTGGCTTTG CGCATCGCAT ACGGAATGAC TTCCCCGACG GTCAGTTGTT CGTGAACCTG
CGCGGTTACG ACCCGGGACC GCCGCTGTCT TCCGCAGCGG CGTTGGAACG CTTCCTCCGT
GCGCTCGGGG TGCCGCCCGG CGCCATTCCG GTCGACCTTG AGGAACGCGC GGAGCTCTAC
CGAACGCTGC TGGCCGATCA TCGCATCCTG ATTGTCTTGG ACAACGCCGC GACCGTCGGT
CAGGTCCGTC CGCTGCTGCC CGGCGAGCCC GGATGTCTGG TGCTGGTCAC CACTCGCGGC
AGGTTGTCCG GGCTGTCCGC GCGCGAGGGG ACCCATCGGA TCTCGTTGGG GCTGCTGGAT
CAGGCTGAAG CTGTGGCGTT GGTGGAGGAA ACGACTGCGC CGTATCGTGA TCCCGATCCG
CCGGAGCAGG TCTCTGAGCT GGTCGCCTTA TGTGCCCGGC TGCCATTGGC GTTGCGGATC
GTCGCCGAGA GGGCGGCTGT CAGACCCCAT ATGCCTCTCC GAGAGCTGAT TTCGGATCTG
AGGCGAGAAT CGTCGTTGTG GGACGCGCTG TCCGCCGAGG ACTCAGCCGA TCCTGACGCC
GACGCGGTGC GCTCGGTGTT CGCCTGGTCT TACCGCGCGC TGCCGCCGGC GGCGGCCAAG
GCGTTCCGAC GCCTCGGGCT GCACCCCGGA CCCGAGTTCG GCTCGGGCGC GGCTGCCGCT
CTGGTCGGCG ACGATCTGAA GCGCACCCGG GGTCTGCTCG ACATCCTCGT CGGTGGTCAT
CTGCTGGAGC AGGTCGGTCC GGATCGCTAC CAGTTCCACG ACCTGCTCAG GGCATACGCA
CTCAGCCAAG TACATAGCGA TGAGAGCCCT GAAGAACGCG CCCTCGTCCT GAACCGCGTC
ATCAAGTGGT ACTTGTACGG AGCCAGTGCC GCAGTGGCCG CCACGCAGAC TCTCATCGAG
CCGGTAGCTG TCGAACCACC TGAGGCGACG CTGGAGCTTC CGGCCTTCGA CTCCACAACC
CAAGCCACGG ACTGGTACGC CGCCGAACGA GCCAACCTGA TTGCCGCGGT CCGCGTCGCC
GCCGAATCCG GCTTCCACAC ACTCGCATGG CAGATATCTG CGACGCTCTA TCCCATCCAG
GACGCCTACG GATCGCTCGA CGACTGGATC GACACCTCGA GCCAAGGACT GGAATCCGCA
CTGGCGGCAG GTGACCTCGC GGGACAGGCA TCGCTCCTCT ACAGCCTCGG CGCGGCTCTT
AGCGGCTCCC GCGAGTTGGA GCAAGCCGAA CCGCGCTTGG CGGAAGCAGT CCGGCTCTTC
ACTGAACTGA ACGATCGAAA CGGCCTTCTT CGCGCGACCA ACGCCCTAGG CCTGGTTAAC
CTCCGCCGCC GTCGATTCGA CGAGGCGGAA TCAATGTTTA TAACTTGCAT GTCTCTCGCC
GAGGAAGGCG AACAGCACGC GTGGCGTGCC ACGGCGTTGG ACAACCTCGG CTCCGCTTAC
GACGCGATGG GCGGTCGGCC ACAGGAGGCA GCCGAACTCT CCCTGGAGGC GCTGCAACAG
CTCCGCTCCA TCGATGCCGA CCCGCGTACC CTCGTCGACC CCCTCCTCAC GCTGGCACGC
ATAGCCCGCG ATGTAGGCGA CCTCGCGCAG GCGGAGGCGC ACGTGAACGA GGCGACGGAG
ATCATCGGCA GCGGCGTGGT CTTTCGCTCG CTCGCCTTTG CCGTTCTCCT CGAACAAGCC
GTTCAAGCCC TGCTTCACGG CCGCCACGAC CAAGCCATGG AGACGTACTT CCGCTGCTTG
GCGATGGCGC GGGAAATCGG CGATCGGACG CGCGAAGCGC TTGCGCAGGA CGGCATCGGC
AGGGTGTTGC AAGCGACCGA CCGCGTTGCC GAAGCTGTCG AGTTCTACAG GGTTGCCGCC
ACCTCCGGGC ACCCCAACGT GTTCGAGAAA GCATCGATTC TTCACCACCT CGCGGATGCC
CTGGAACAGA CGGCGCAGGC GGACGCGGCG AACAACGTGC GGCATCAGGC GCTCAAACTC
CTGGAGCCCT TCACTGACAA GCGCAGTGCG GATCTGCGCA ACAGACTGTC GTAG
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| Protein sequence | MADSQPMKPG ANTVSSWLSG NAREVVQARD ISGGIHIHSA DPSPLPRPRQ LPAEVSAFVG
RRREFELLQS WVRGGGGAGS AAGGSVLIVG TAGVGKTSLA VGFAHRIRND FPDGQLFVNL
RGYDPGPPLS SAAALERFLR ALGVPPGAIP VDLEERAELY RTLLADHRIL IVLDNAATVG
QVRPLLPGEP GCLVLVTTRG RLSGLSAREG THRISLGLLD QAEAVALVEE TTAPYRDPDP
PEQVSELVAL CARLPLALRI VAERAAVRPH MPLRELISDL RRESSLWDAL SAEDSADPDA
DAVRSVFAWS YRALPPAAAK AFRRLGLHPG PEFGSGAAAA LVGDDLKRTR GLLDILVGGH
LLEQVGPDRY QFHDLLRAYA LSQVHSDESP EERALVLNRV IKWYLYGASA AVAATQTLIE
PVAVEPPEAT LELPAFDSTT QATDWYAAER ANLIAAVRVA AESGFHTLAW QISATLYPIQ
DAYGSLDDWI DTSSQGLESA LAAGDLAGQA SLLYSLGAAL SGSRELEQAE PRLAEAVRLF
TELNDRNGLL RATNALGLVN LRRRRFDEAE SMFITCMSLA EEGEQHAWRA TALDNLGSAY
DAMGGRPQEA AELSLEALQQ LRSIDADPRT LVDPLLTLAR IARDVGDLAQ AEAHVNEATE
IIGSGVVFRS LAFAVLLEQA VQALLHGRHD QAMETYFRCL AMAREIGDRT REALAQDGIG
RVLQATDRVA EAVEFYRVAA TSGHPNVFEK ASILHHLADA LEQTAQADAA NNVRHQALKL
LEPFTDKRSA DLRNRLS
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