| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1964 |
|---|
| Symbol | |
|---|
| ID | 8333307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 2220516 |
|---|
| End bp | 2221022 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 644955113 |
|---|
| Product | transcriptional regulator, MarR family |
|---|
| Protein accession | YP_003112725 |
|---|
| Protein GI | 256391161 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0924411 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCACCG AACCGAAGCG CACCCGGGGC GCGGCCGCGC CGTCCCGGCC CGCCGCCGAC
GCAGGCCTCG AAGACGCGGT CCGCGACCTG CTCCTGCTGA TGCCCCGCCT GGTCGCCCGC
GCCAAACGCA TCCCCCCGCC GCCGGAACTC CGCGACCTCA CCCTCGGCCC GCGCCACCTG
TCCCTGCTGG TCTTCCTCCT GCTCGACGGC CCGATGACGG TCAACGACCT TGCCGCCCGC
CTCCAGGTCG CGCCCACCAC CACCAGCCTG GTGATCGCCG ACCTGAGCCG CAAAGGCGTC
CTGCACCGCG CCGAGGACGA CACCGACCGC CGCCGCCGCA TCATCAGCAT CACCCCCGCC
GCCCGCCCCG CCATCGAGAC CTGGCTCGCC CCCGGCGCCG AAGCCTGGCG CCGCGCCCTG
CGCCCCCTGA CCCCCGCCCA ACGCCGCACG GTCGTGGACG CGCTGCTGGC CTACGAGGCG
GCTGTCGGAG AGCTGCGGGA GGGGTGA
|
|---|
| Protein sequence | MSTEPKRTRG AAAPSRPAAD AGLEDAVRDL LLLMPRLVAR AKRIPPPPEL RDLTLGPRHL
SLLVFLLLDG PMTVNDLAAR LQVAPTTTSL VIADLSRKGV LHRAEDDTDR RRRIISITPA
ARPAIETWLA PGAEAWRRAL RPLTPAQRRT VVDALLAYEA AVGELREG
|
|---|
| |