| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1959 |
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| Symbol | |
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| ID | 8333302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 2216439 |
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| End bp | 2217269 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644955108 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003112720 |
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| Protein GI | 256391156 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.222894 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCATG CCCGCACAGT CCTCATCACC GGCGCGACCG ACGGCCTCGG TCGTGCGCTG
GCCCATCGGT TGGCCGCCGG GGGCGACACC GTTCTGTTGC ACGGACGCGA TCAGGGGCGT
CTCGATGCGA CCGCGGATGC CATCCGCGAC GAGCACGGGG TCGCGCGGCC CGCGACGTTC
CGTGCCGATC TGGCGGAGCT GGCGCAGGTG CGCGAGCTTG CGGCTGCGGT GCGGGGCGCC
ACCGAGCGCC TCGACGTCCT GGTGAGCAAC GCCGGCATCG GCAGCGGGGA GCCGGACGGC
CGCGATCGGC GCGAGAGCAA GGACGGCTAT GAGCTCCGCT TCGCGGTGAA CTACCTGGCC
GGGTTCCTGT TGACGCAGGA GTTGTTGCCG CTGCTGCGCG CCTCGGCGCC GGCGCGGGTG
GTGAACGTCG CCTCGCTCGG GCAGCAGGAG ATCGAGTTCG ACGACGTGAT GCTGGAGCAC
GGGTACAGCG GTATCCGGGC GTACTGCCAG AGCAAGCTGG CGCAGATCGC CTCGACGGTG
GAGCTGGCCG AGCGCGTGCC GGCAGCGGAG GTCACGTTCA ACAGCCTGCA TCCGGCGACG
TACATGCCGA CGAAGATGGT GCTCCAGGAA GCCGGGCACA GCATCGACAG CCTGGAGACC
GGCGTCGAGG CGACGTGGCG GCTCGTGACG GATCCGAAGC TGGCAGGGGT CAGCGGACGG
TTCTACGACC GGCAGCGGGA GTCACAGGCC TTGAAGCAGG CCTATGACAC GCGGGCGCGG
GCGGAGTTGT ATCAGCTGAG CTTGAAGTTG GTCGGGCTCA CGCAGGGATA G
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| Protein sequence | MTHARTVLIT GATDGLGRAL AHRLAAGGDT VLLHGRDQGR LDATADAIRD EHGVARPATF
RADLAELAQV RELAAAVRGA TERLDVLVSN AGIGSGEPDG RDRRESKDGY ELRFAVNYLA
GFLLTQELLP LLRASAPARV VNVASLGQQE IEFDDVMLEH GYSGIRAYCQ SKLAQIASTV
ELAERVPAAE VTFNSLHPAT YMPTKMVLQE AGHSIDSLET GVEATWRLVT DPKLAGVSGR
FYDRQRESQA LKQAYDTRAR AELYQLSLKL VGLTQG
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