| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1955 |
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| Symbol | |
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| ID | 8333298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 2212835 |
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| End bp | 2214109 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644955104 |
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| Product | Mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_003112716 |
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| Protein GI | 256391152 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.23587 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACT TGAAGATCGT GGACGTGGTC ATCACCCCGG TCGCGCTGAA GGATCCACCG
CTGCTCAATT CCTCCGGCGT GCACGAGCCG TTCGCCCTCC GTTCCATCGT CGAGGTCCAG
ACCGACGCCG GCATCGTCGG GATCTCCGAG GCCTACGGCG ACGACGCGAC CCTGGCGCTG
CTGCACCAGG CTGCCACGGC GGTGGTCGGT ACCGACGTGT TCGACCTCAA CGAACTGAGC
CGCCGGGTCG CGAGCGCGGT CGGCGGCTCA GCCGCGTCCT CGCCGACCGA GCTGATCGGC
ACGGCCAGCC ACGACAAGAC CGTCGCCCAA GCGACCGCGG CCTTCGAGGT GGCTTGCTAC
GACGCGCAGG GCAAGGCCAC CGGCCGCCGC GTCGTCGATC TGCTCGGCGG CGCGGTCCGC
GAACGCGTCG ACTTCAGCGC CTACCTCTTC TACAAGTGGG CCGAGCACCC CGGAGACTTC
GACGTCGACT CCTGGGGCGA GGCGCTGGAC CCCGACGGCA TCGTGAAGCA GGCGCGCCGG
ATGGTGGACC GCTACGGCTT CGGCTCGCTG AAGCTCAAGG GCGGCGTCTT CGCGCCTGAG
GAAGAGATCG AGGCAGTCAA GGCTCTGCGA CGCGAGTTCC CCGACCGTCC GGTGCGCATC
GACCCGAACG CGAACTGGTC GGTGCAGACC AGCCACCGGG TCGCCGCAGC GCTGGAGGGC
GAACTCGAAT ACCTCGAGGA CCCGACGCCG GGCATCCCGG GGATGGCCGA GGTCGCGGCG
AAGACGTCGC TGCCGCTGGC GACCAACATG TGCGTGACGA GCTTCGCGGA GATCCCCGAG
TCGGTGCGGC TCGGCGCGGT GCAGGTGATC TTGTCCGACC ACCACTTCTG GGGCGGCTTC
CGGGCCACGC AGAACCTGGC GGCGCTGTGC CAGACCTTCG GTTTGGGACT GTCGATGCAC
TCGAACACCC ACCTCGGGGT CAGCCTCGCG GCGATGGCGC ACATCGCCGC CGCGACACCG
AATCTGACCT ACGCGCTCGA CACGCACACG CCGTGGAAGT CCGAGGAGGA GGACGTCGTT
CTCGGCGGCG GGCTCACCTT CACCGACGGC GCGGTGACGC TGCCTTCCGG TCCCGGACTC
GGCGTGGAGT TGGACCGGGA CGCGCTCGCC AAGCTGCACG AGCAGTACCT GACGTGCGGG
ATCCGGCGGC GCGACGATGT GGGATGGATG CGGCAGGTGC ACCCGGAGTG GACCGGCAAG
CGGCCGCGGT TCTGA
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| Protein sequence | MTDLKIVDVV ITPVALKDPP LLNSSGVHEP FALRSIVEVQ TDAGIVGISE AYGDDATLAL
LHQAATAVVG TDVFDLNELS RRVASAVGGS AASSPTELIG TASHDKTVAQ ATAAFEVACY
DAQGKATGRR VVDLLGGAVR ERVDFSAYLF YKWAEHPGDF DVDSWGEALD PDGIVKQARR
MVDRYGFGSL KLKGGVFAPE EEIEAVKALR REFPDRPVRI DPNANWSVQT SHRVAAALEG
ELEYLEDPTP GIPGMAEVAA KTSLPLATNM CVTSFAEIPE SVRLGAVQVI LSDHHFWGGF
RATQNLAALC QTFGLGLSMH SNTHLGVSLA AMAHIAAATP NLTYALDTHT PWKSEEEDVV
LGGGLTFTDG AVTLPSGPGL GVELDRDALA KLHEQYLTCG IRRRDDVGWM RQVHPEWTGK
RPRF
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